Polypterus senegalus (gray bichir): 120525735
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Entry
120525735 CDS
T08668
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
psex04210
Apoptosis
psex04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120525735 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120525735 (parp1)
04217 Necroptosis
120525735 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120525735 (parp1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120525735 (parp1)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120525735 (parp1)
Enzymes [BR:
psex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120525735 (parp1)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120525735 (parp1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120525735 (parp1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120525735 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
DUF4600
Motif
Other DBs
NCBI-GeneID:
120525735
NCBI-ProteinID:
XP_039604229
LinkDB
All DBs
Position
3:complement(183195267..183405689)
Genome browser
AA seq
1008 aa
AA seq
DB search
MAETLEDKLYKAEYAKSGRSSCKKCKESISKGSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RARVLSPGDIDGYSDLRWEDQEKVKKAIESGEATATGIGGKKGDGRSEKTLNDFAVEYAK
SNRSTCKGCEQKIEKELIRLSKKMIDPEKPQLGMIDRWYHIACFVSRREELGFMAAYNAS
QMKGFAILRTEDKEELKQRLPVLKSEGKRKADEIDGDLSFKKKMKKSEKEDKQLEKQLKD
QSQLIWNIKDELKKYCSLNDMREILIANKQEVPSGESAILDRVSDGMAFGALQPCEQCQG
QLVFKSDGYYCSGNITAWTKCVFKTQIPNRKEWIIPKEFHEVVFLKKFKFKPQDRLFAPV
PPQCHPKTTESNASSIKEETVPSDKPLTNMMVICIGKLVKNKEEIKAVIEELGGKLTGSA
NKATICISTKKEVQKLSKKMEEVKAANVRVVVEEFLSEVKTSGKAVQELLSLHAISPWGA
EVKQETPVIVTKSTGTPTGKSSGKIKEEEGSSKSKKMKLTLKGGAAVDPDSGLEKCAHVL
DQNGKIFSATLGLVDISRGTNSYYKLQLLEDDSKKRYWVFRSWGRVGTTIGGNKLDKFSD
KNSAIDAFVSIYEEKTGNTWHSAKFTKFPNKFYPLEIDYGQDEEAVRRLTASAGTKSVLA
KPVQELIKMIFDVESMKKAMVEFEIDLLKMPLGKLSKRQIQSAYSILNEVQQTVSTGGTE
SQVLDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSLLRGGAEDDN
KDPIDINYEKLKTVIEVVDRKSHEAQIIREYVKNTHAATHNTYTLEVEDIFKILREGEYQ
RYRPFKDLPNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVSKSAN
YCHTSQADPVGLILLSEVALGNMYELKQAAHITKLPKGKHSVKGLGKTAPDPKATINLNG
VDVPLGKGISTNISDTSLLYNEYIVYDVAQVNLQYLVKIRFNYHSSLW
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactcttgaggataagctttataaagccgaatacgctaaaagtggacgttca
tcgtgtaaaaaatgcaaagagagcatttcaaaaggttcgctgagaatggccattatggtg
cagtcacctatgtttgatggaaaagttcctcactggcaccatttttcatgtttctggcaa
agagctagagtgttatctcctggtgatattgatggatactctgacttgagatgggaggac
caggaaaaggtgaaaaaagccattgaatctggtgaagctactgccacagggattggtgga
aaaaaaggtgatggtagatctgagaagacattaaatgattttgcagttgagtacgcaaag
tccaacagaagcacatgcaaaggttgtgagcagaagattgaaaaggaactaattcggtta
tcaaagaaaatgatagacccagaaaaaccacaacttggaatgatagatcgatggtaccat
attgcttgttttgtcagtcgaagagaggagcttgggttcatggcagcttataatgcatcg
caaatgaagggatttgccattttgagaacagaggataaggaagaactgaaacaaaggcta
ccagttttgaaaagtgaaggaaaaagaaaagctgatgaaatagatggagatttgtccttc
aagaaaaaaatgaaaaaatcagaaaaggaagataagcaactggagaaacaattgaaggat
caaagtcagttgatctggaacattaaggatgaactgaagaagtattgttcactaaatgac
atgagagagatacttattgcaaacaagcaggaagttccttctggtgaatctgctatcttg
gacagagtttctgatggcatggcatttggtgccctgcaaccttgtgaacagtgtcaaggt
caactggtctttaaaagtgatgggtattattgttctggaaacataactgcatggacaaaa
tgtgtttttaaaacacagattcctaatcgcaaagaatggattattcccaaggaattccat
gaagttgtctttttaaagaagtttaaatttaaacctcaagacagattgttcgcccctgta
cctccacagtgtcatcctaaaacaactgaatctaatgcttccagtataaaagaggaaact
gttccaagtgacaaacctctaactaatatgatggtcatttgtattggcaaactggtgaag
aacaaagaagagattaaagctgtaattgaggagcttggaggaaagttaactggctcagcc
aacaaagccacaatctgtattagtacaaagaaggaagtacagaagttgtccaagaagatg
gaagaagtaaaggcagccaatgttcgtgtggttgttgaggagtttttgtctgaagtaaaa
acttctggcaaggcagttcaagagctactttctcttcatgccatctcgccctggggagct
gaagtcaaacaggaaactcctgtgatagtaacaaaatccactggtacaccgacaggaaag
agctctgggaaaataaaggaggaagaaggctctagcaaatcaaaaaaaatgaaactaact
ttaaagggaggagctgcagtggatcctgactctggactagagaagtgtgctcatgttctt
gatcaaaatggaaaaatttttagtgccactttaggactagtggatataagcagaggaact
aattcttactacaaacttcaactcctagaagatgatagtaaaaagaggtattgggtgttc
agatcatggggacgagttggcacgacaattggtggtaacaaattagataagttttctgac
aagaactctgctattgatgcatttgtgtccatttatgaggagaaaactggaaatacatgg
cactccgcaaagttcaccaagtttcccaacaagttttacccattggaaatagattatggt
caggatgaagaagcagtgaggagattgacagctagtgctggaactaaatctgttcttgca
aaaccagttcaagagctcattaaaatgatttttgatgtggagagtatgaagaaagctatg
gtggagtttgagattgatcttcttaagatgcctttgggaaagcttagtaagaggcaaatc
cagagtgcatattctatccttaatgaagttcaacagacagtttctactggaggcacagag
tcacaagtactggatttatctaatcggttctataccctgattccccatgactttggtatg
aagaagcctccacttttaaataatttggactatatacaggccaaagttcagatgttggat
aatcttctggacatagaggttgcttacagtcttctcagaggtggtgcagaagatgacaat
aaagatcctattgatatcaactatgaaaaactaaaaactgtgatagaggttgttgacaga
aaatctcatgaagctcaaatcattcgggaatatgtcaagaatactcatgctgcaactcac
aatacttacacacttgaagttgaagatatttttaaaatattacgtgagggtgagtaccag
cgatacaggcccttcaaagatcttcccaacagacagctgctttggcatggttcccgcacc
actaattttgctggcatcctttcccagggactcagaatagcacctcctgaggcacctgta
actggttatatgtttggtaaaggagtttattttgctgatatggtttctaaaagtgcaaat
tactgccatacttctcaagctgatccagtaggtctcattttgctaagtgaagttgctctt
ggaaacatgtatgaactgaagcaagctgctcatattactaagctacctaagggtaaacat
agtgtgaaaggcttgggtaaaacagctccagatcctaaggcaacgattaatttgaatgga
gttgatgttccccttgggaaaggaattagtactaatatttctgacaccagtctgctttac
aatgaatatattgtctatgatgttgcacaagtcaatcttcaatatctggtgaagataaga
ttcaactaccattcatctctctggtaa
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