Polypterus senegalus (gray bichir): 120525888
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Entry
120525888 CDS
T08668
Symbol
sort1b
Name
(RefSeq) sortilin 1b isoform X1
KO
K12388
sortilin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120525888 (sort1b)
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR
BNR_6
BNR_2
Mo-co_dimer
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120525888
NCBI-ProteinID:
XP_039604491
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Position
3:complement(222439255..222541965)
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AA seq
815 aa
AA seq
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MSVVKLCVVAVLFFTGSLAANVYAQAEQPCQRSGAEETYQRKVGSSQALTGSSNARRRRS
SETSDTCKVWQGYEIRLRNNTHPYQFIDLSGSVSLAWVGDGTGVVLALTTFQVPLLLVKF
GQSKLYRSENYGKSFSDVSDLINNTFIRTEFGIAIGPDNSGKVILTGEVSGGSPGGRIFR
SLNFGYNFTQTDLPFHPLTQVTYNPRNASHLLVLSIKYDLWISLNFGETWKKIHDVVCLA
KWDLDHTVFFTTNPNGSCIDRGMLILKKTSDFGESFKTIGDKIYSFGLGGRFVFASVMTG
VGTMRRIHVSVDQGETWNMAQLPPVGHEQFYSILAANDDMVFMHVDEQGDTGFGTIFVSD
DRGIIYSKSLERHLYTTTGGDTDFTNVTSLRGVYMTSVLAEDGSVQTVITFDQGGEWNPI
QKPENGQCDSTAKDKEKCSLHIHATYSMSQKLPVPMLPLSEPNAVGLVIAHGSVGDAISL
MTPDVYVSDDGGYSWTKALNGPHHYAILDSGGLIVAVEHNANQPIKHIKFSTDEGQCWYN
YTFTEDPIYFTGLASEPGARSMNVSIWGYRDSMLSQFWVSITIDFKELLTRDCDMNDYVQ
WLAHSSDLSNPNDGCILGYKEKYLRLRKSSVCWNGRDYIVNKQPTTCPCSLEDFLCDFGY
YRTENSSICLEQPDLKGHDLEFCLHGKEEMLKTNGYRKIPGDQCQGGKVPERKEIDLRKK
CVSTLLYPSEKVSQSTASSALVIAAVITILLLTVIAGVIFVKKYVCGGRFLVHRYSILKQ
HAEANGIDGVDELDINSSESNRQTYHDDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtgaaattatgcgtagtggccgttctcttctttaccgggtcgctagcggca
aatgtgtatgctcaggctgagcagccctgtcaaaggagcggggcagaagaaacatatcaa
cgaaaggttggtagcagtcaggcgctgaccgggagcagcaatgcaagaagacgacggagt
tcagagactagcgacacctgcaaagtttggcagggatatgagatccggttacggaacaac
acccacccgtatcagttcattgacctaagtggatcagtatcattggcttgggttggcgac
ggaactggtgttgttttggcattaacaaccttccaggtgcctctgctgctggtgaaattt
ggccaatccaagttgtatagaagtgagaattatggaaaatctttttcagatgtcagtgat
cttattaataataccttcattaggacagagtttgggattgctattggccctgacaattca
ggaaaggtgattcttacaggagaagtatccggtggaagcccaggtgggaggatctttcga
tcactgaattttgggtacaatttcacccagactgatctcccattccatcctttgacacaa
gttacctacaatccaagaaatgcgagtcatttgttagttttaagcataaaatatgatctt
tggatttcattgaattttggggaaacatggaagaagattcatgatgtagtctgccttgca
aaatgggatttggaccatacagtattcttcactactaatcctaatggctcatgcattgac
cgaggcatgttgattttaaaaaaaacctccgactttggggaatcgtttaagaccattgga
gataagatctactcttttggccttggaggacgttttgtttttgcatctgtaatgactgga
gtgggcacaatgagaaggatccatgtatctgtggaccaaggagagacatggaatatggct
caacttccccctgttgggcatgaacaattctattcaatcctggcagcgaatgatgacatg
gtcttcatgcatgtggatgaacaaggggatacaggttttggaacaatatttgtttctgat
gaccgtggaattatatattccaagtctttggaaaggcacctgtatactacaacgggtgga
gacacggatttcaccaatgtaacatcacttcgtggcgtttacatgaccagtgttctggct
gaggatggctctgtacagacagtgatcacctttgatcagggaggtgagtggaatcccatt
caaaagccagaaaatggccaatgcgattcaactgccaaagacaaggaaaagtgcagcctc
cacattcatgctacttatagcatgtcgcagaaactccctgtacccatgctgcctctgtct
gagcccaatgcagtgggattggtcattgcccatggcagtgtgggtgatgctatctcttta
atgacacctgatgtatatgtttctgatgatggaggatactcttggactaaagctttaaat
gggccccatcattatgccattcttgactcaggaggactcattgttgctgttgaacacaat
gccaaccagccaatcaagcacattaagttttccacagatgaaggccaatgttggtacaac
tatactttcacagaggatcctatatactttacaggattagcttccgaaccgggagctcga
tcaatgaatgtcagcatctggggttaccgggacagcatgctttcacagttctgggtgtcc
atcactattgacttcaaagagcttcttaccagagactgtgacatgaatgattatgttcag
tggctagcacactccagtgatctcagtaaccccaatgatggctgtatactaggttataaa
gaaaaatacctgaggctccgaaagtcttctgtttgttggaatggtcgtgattacatagtg
aacaaacagcccaccacttgcccctgcagtttggaggatttcctttgtgattttgggtac
tatcgtacggaaaacagctctatatgtttggagcagcctgatctgaaaggtcatgacctt
gaattctgcctgcatgggaaggaggagatgctgaagaccaatgggtatcgtaaaatccca
ggagaccagtgccaaggtggaaaagtgcccgaacgtaaagagattgacctccgcaagaaa
tgtgtcagcactctgctgtaccccagtgaaaaggtatcgcagtcaactgccagttctgct
ctagtgattgctgcagttatcacaatcttactgctgacagtcattgctggggtgattttt
gtgaagaaatatgtttgcggtggaaggtttttggtacacagatactcaattctcaaacag
catgcagaagctaatgggattgatggagtagatgaattagacataaacagttctgaatct
aacagacaaacgtaccatgacgattctgatgaggatctccttgaataa
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