Polypterus senegalus (gray bichir): 120525930
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Entry
120525930 CDS
T08668
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S-like isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04020
Calcium signaling pathway
psex04260
Cardiac muscle contraction
psex04261
Adrenergic signaling in cardiomyocytes
psex04270
Vascular smooth muscle contraction
psex04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120525930
04020 Calcium signaling pathway
120525930
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120525930
09153 Circulatory system
04260 Cardiac muscle contraction
120525930
04261 Adrenergic signaling in cardiomyocytes
120525930
04270 Vascular smooth muscle contraction
120525930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120525930
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120525930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
HemY_N
Motif
Other DBs
NCBI-GeneID:
120525930
NCBI-ProteinID:
XP_039604563
LinkDB
All DBs
Position
3:complement(225662928..225752639)
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AA seq
1853 aa
AA seq
DB search
MEPNAVAALPDSDTLQRKKQKEKLKKQATAANPRPARALCCLTLRNPFRKACISIVEWKP
FEVIILLTIFANCVALAVFLPMPEDDTNLANSSLEKVEYIFLIVFTIEAFLKIVAYGFLF
HPDAYLRNGWNILDFIIVFVGLFTVALEAINRIEGIETPVGGKGAGFDVKALRAFRVLRP
LRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIIGLELFKCKMHKTCYYSGTE
IVAIVEGEKAAPCAVGGHGRECLINGTECKGGWPGPNNGITHFDNFGFAMLTVYQCITME
GWTDVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQK
LRERQQLDEDLRGYMDWITHAEVMDPDQVHREGLLALDDAGSETESLYEIEGMNRCIFLL
RQSRRWHRWFRRKCRVWVKSSFFYWLVILLVFLNTLAIATEHHNQSEWLTNVQDTANKVL
LSLFTAEMILKMYALGFQSYFMSLFNRFDCFVVCIGIVELILVEISLMSPLGISVLRCIR
LLRIFKITRYWTSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQVFGGKYNFEDTE
VRRSTFDTFPQALISVFQILTGEDWNSVMYNGIMAYGGPSFPGVLVCIYFIILFVCGNYI
LLNVFLAIAVDNLAEAESLTSAQKEKAAEKKRRKMARANKPEKSEEEKLLLAKKLEQKAR
GEGIPTTAKLKVDEFESNVNEIKDPYPSADFPGDDEEEEPDIPLSPRPRPLAELQLKEKA
VPMPEASSFFIFGPQNKIRKLCHRIVNATTFTNFILLFILLSSISLAAEDPIDPESFRNQ
ILAYFDIVFTVIFTTEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISFGIQSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFACIGVQLF
KGKFRMCTDLSKMTEEECRGEYIVYKENDLHQLEIRQRMWYNSDFHFDNVLSGMMALFTV
STFEGWPQLLYKAIDSHTEDMGPIYNYRVEMSIFFIVYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVQYALKARPLRRYIPKNPYQYQVWYVVTSSYFEYLMFVLILL
NTICLGMQHCGQSEEINYISDMLNVVFTGLFTLEMVLKLMAFKAKGYFGDPWNVFDFLIV
IGSIIDVILSEIDTALASSGGLYCLSGGCAESEDNSRISITFFRLFRVMRLVKLLSRGEG
VRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVDGTQINRNNNFQTFPQA
VLLLFRCATGEAWQEIMLDCMYGKLCDPNSDFLPGEEYTCGSSFAVFYFISFYMLCAFLI
INLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPP
LGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQSNEELRA
IIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFRKFMKRQEEYYGYRPTKKS
AVEIQAGLRTIEEETGPELQRAISGDLTAEEELERAMEEAGMDEGIYRRSGGLFGNHIDH
FPMERSSPMPSHVTSQRPLQFADTRNEDIESPPDSAFLHNEIEFFPLQDNVKNTNNNAVD
RFDYQSETAREQSIATIDELINCSPPQMKKSNKPVRSLSFHLNYLKHCLNQQREDDNLFS
EISVQNLHRQDDRSSVRCSSTSLPTDWLYQGSQFTMRGTPVLATDQLIQEVLIDGGLAAL
ANDAKFIAVTKQEMADAIQIDLSEMEGAAMVLLNGRRGHVVHPNSDESMNTQL
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacgctgtggctgctctccctgacagcgacacactacaaaggaagaaacag
aaggagaaactgaagaaacaggccactgctgccaaccctcgaccggccagggccttgtgc
tgtctgaccctccgcaaccccttcagaaaagcttgcatcagtattgtggaatggaaacca
tttgaagtcatcattctacttaccatctttgccaattgtgttgcattggctgttttcctc
ccaatgcctgaagatgatactaatttggccaactcaagtctggaaaaagtggaatatatt
tttctaattgtcttcaccatagaggcctttttaaagattgtagcatatggatttctcttt
cacccagatgcctatttgcggaatggttggaacatattggatttcatcatcgtttttgtt
ggcctcttcactgtagccctggaagccatcaatcgtatcgaaggaattgaaactccagtt
ggtggcaaaggggctggatttgatgtgaaggctcttcgagctttccgggtccttcgacct
ctgcgccttgtctctggagtgcctagtttacaggttgtgctgaattctatcatcaaagcc
atggtgcctctcctgcatattgctctgcttgtccttttcatgattatcatctatgccatc
attggtttagagctcttcaagtgtaaaatgcacaagacgtgctactacagtggcacagaa
attgtcgccattgtagagggtgagaaggcagctccatgtgcagtgggagggcatggccgt
gaatgcctgatcaatgggactgaatgtaaaggaggatggccgggacccaacaatggcatc
acacactttgacaactttggctttgctatgttgacagtgtatcagtgcatcacaatggaa
ggctggactgatgtgctttattgggttaatgatgcaattggaaatgaatggccatggatt
tattttgtgagtctcattctccttggatccttttttgtactcaacttggtgcttggtgtc
ttgagtggtgaattcaccaaagaacgtgagaaagccaaatcccgaggaactttccagaag
ctgcgagaaagacaacagctggatgaggatcttcggggttacatggactggattactcat
gcagaggtcatggatcctgatcaggtgcacagagaaggcttactggccttggatgatgct
ggatcagagactgagagcctttatgagattgaagggatgaacaggtgcatctttttgcta
cgacagagtcgacgctggcataggtggtttcgcagaaagtgtcgtgtctgggtgaagtcc
agttttttctattggctggtgatcttgctggtgttccttaacacactggccattgcaaca
gagcaccataaccaatcagagtggcttactaatgttcaagacactgctaacaaagttctt
ctgtcactgttcactgctgagatgatactcaagatgtatgcattggggttccagtcttac
ttcatgtccctgtttaatcgatttgattgttttgtggtctgcattggtatagtggagctg
atcctggttgaaatcagtttaatgtcacctctaggtatttctgttttgaggtgcatccgg
ttacttcgcatctttaaaattaccagatactggacttctctaagcaacctggtggcttca
ttactcaattcagtacgttccattgcctcactactgctcctcctttttcttttcatcatc
atcttctcactccttggtatgcaagtgtttgggggcaagtacaactttgaagacactgag
gttcgtcgcagcacctttgacactttccctcaggccctcatcagtgtcttccagattctc
acaggggaagactggaattcagtaatgtacaatggaattatggcctatggtggaccttct
ttcccaggagtacttgtctgcatctatttcatcatcctctttgtctgtgggaactatatc
ctgctgaatgtcttcttagccattgctgtggacaacctggcagaggcagaaagtctaacc
tcagcacagaaagagaaggctgcagagaaaaaacggaggaaaatggcaagagccaacaaa
cccgaaaagtcagaagaggagaagctgcttttggcaaagaaattagagcaaaaagcaaga
ggagaaggaattccaaccactgctaagctcaaagtggatgagtttgaatccaacgtaaat
gaaataaaagatccctacccttctgcagattttccaggtgatgatgaggaagaagagcct
gacattcccctaagccctaggccccgtccccttgcagaactacagcttaaggagaaggct
gttccaatgccagaagccagttcttttttcatttttgggccacagaacaagattcggaag
ctttgtcaccggattgtcaatgccaccaccttcactaactttatcctcctctttattctg
ctgagcagtatttctttagctgctgaagaccccattgatcctgagtccttcagaaatcag
attcttgcttactttgacattgtcttcactgtgattttcacaactgaaattgttctaaag
atgaccacatatggtgcatttctgcacaaaggttctttttgccggaactactttaacatc
ctggacttgctagttgttgccgtgtctcttatctcctttggtatccagtctagcgccatc
tctgtagtaaagattctgagggtattgagagtcttaaggcccttaagagccattaaccgt
gcaaaaggattaaagcacgtggtgcagtgtgtgtttgttgcaatcaaaacaattgggaat
attgtcattgtaaccacacttctgcagttcatgttcgcctgcatcggagtccagctgttt
aagggcaagtttcgcatgtgcacagatctctctaaaatgacagaagaagagtgcagaggc
gaatacattgtatacaaggagaatgacttgcatcagttggagatccggcagcgcatgtgg
tacaacagcgattttcactttgacaatgtgctatcaggcatgatggccctcttcactgtt
tccacgtttgagggttggccacagcttctttataaagcaattgactcccacacagaagac
atggggcccatttacaactaccgagtggaaatgtccatttttttcattgtttacataatt
ctcattgccttctttatgatgaacatctttgtgggctttgttatcgtcacctttcaggaa
caaggagagcaggagtacaaaaattgtgagctggataaaaatcagcgtcaatgtgtacag
tatgcattgaaggcccgtccattgcgtcgctatattccaaagaatccctaccagtaccag
gtgtggtacgtggttacatcatcttattttgagtacttgatgtttgtgcttattcttcta
aacactatctgcttaggcatgcagcactgtggccagtcagaagaaattaattacatttca
gacatgctaaatgtggtcttcactggcctttttactcttgaaatggtactgaaactaatg
gccttcaaagccaagggatactttggagacccctggaatgtatttgactttctgattgtc
attggtagcatcatcgatgtcatcctaagtgagattgatactgcgcttgcttccagtggg
ggactttactgtctgagcggtggctgtgctgaatctgaggacaactctcgcatctctatt
acttttttccgactcttcagagtaatgcggttggtcaagctacttagccgaggggaggga
gtgcgaacattgctctggacgttcatcaagtcttttcaggctcttccttatgttgctcta
ctgattgtgatgctgttctttatatatgcagtcattggaatgcaggtgtttggcaaaatt
gctttggtggacggaacacaaatcaatcgcaacaataacttccaaacctttcctcaggct
gtgcttttactcttcagatgtgcgacaggtgaagcctggcaggagatcatgttggactgc
atgtatgggaaactttgtgaccccaactcagacttcctgcctggagaggaatatacatgt
ggctccagctttgctgtcttctactttatcagcttctatatgctttgtgcctttctcatt
ataaatctatttgtagctgttatcatggacaactttgactacttgactcgagactggtct
atccttgggcctcatcacttggatgagtttaagaggatatgggctgagtatgaccctgag
gctaagggccgcattaaacatctggatgtagtgacattactgcgtagaattcagccccca
cttggctttggaaagttctgtcctcatcgagtcgcttgtaagcgtcttgtctccatgaac
atgcctttgaacagcgatggcactgttacttttaatgctactctgtttgctttggtgagg
actgccctaaaaattaaaactgaaggtaactttgaacagtccaatgaagaactgagagcc
atcatcaagaaaatttggaagcgaactagcatgaagctgctggaccaggtcattccccca
attggagatgatgaagtgacagtgggcaagttctatgccactttcctcattcaggatcac
ttccgcaagtttatgaaacgccaggaggagtattatggttatcggccaacaaagaagagt
gcagttgagatacaggctgggctgcgcactattgaggaagaaactgggccagagctgcaa
agggccatctcaggtgatcttacagcagaggaggagttggaaagagcaatggaagaagct
ggaatggatgagggcatctaccggaggtcaggtggtttgtttggcaaccatattgatcat
ttcccaatggaaagaagcagtccgatgccatctcatgtcaccagtcaacgtccactgcag
tttgcagacaccagaaatgaagatatcgagtcccctccagattctgcttttcttcacaat
gagattgagtttttccctcttcaggataatgtcaagaataccaacaacaatgcagtagac
aggtttgactatcagagtgagaccgctagagagcaatccatagctactattgatgagctc
atcaactgtagtcctcctcaaatgaagaaaagcaataagcctgttagaagcctctctttt
catttaaactacctgaagcactgcctaaatcagcagagagaggatgataacctgttttct
gaaatttcagtccagaatctacatcgccaggatgacagaagttcagtgaggtgcagcagc
acttctctcccaactgactggctgtatcaaggttcccagttcacaatgagaggcacccca
gtgctggctactgaccagctcattcaagaggtgctgattgatggtggactagcagcatta
gcgaatgatgcaaagtttatagctgtcacaaagcaggaaatggcagatgcaattcaaatc
gacttgtcagaaatggagggtgctgcaatggttctcttgaatgggcgaagaggtcatgtg
gtccatcctaactccgatgaatcaatgaacactcagttgtaa
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