Polypterus senegalus (gray bichir): 120525934
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Entry
120525934 CDS
T08668
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120525934 (mkrn4)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120525934 (mkrn4)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120525934 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-RING_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_4
zf-CCCH_3
zf-RING_UBOX
zf-RING_5
IBR_1
Motif
Other DBs
NCBI-GeneID:
120525934
NCBI-ProteinID:
XP_039604569
LinkDB
All DBs
Position
3:226075513..226091324
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AA seq
424 aa
AA seq
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MERGAYGHRYANCRAPATTRSARLPPCRHFLNGSCPFGQNCRHSHELPAWKSSQVCRYFQ
RGGCWFGDRCRYEHVLQTDGSFLDSRRRSAPVIHPVLSGEAAETRRGSEPSIQQVHGTYA
GSRRVSEPAVASLQRNFERLSTEYEEPTVAEFVPRIQQPKLEILSARSTLQVQNGTSQCH
TRAKSTSAHVPYNPVGNITEENEDLNGLHASKQGENVDTAGSQCRTQNVGVTAAEAYERS
KDVTCGICMDKVYEKPAPDDRCFGILPNCNHAFCLSCIVTWRKTKDFQAEVIKSCPQCRV
KSTYYIPYKYWVSDPVQKQNLISNFKERSGKIKCKFFTRHGCCPFKSECIYLHEMPQGHR
RRRRRRSATQARRLSSDDSDSEGFNILQYAIALALLHEVDDDLLEDYFHRRYFQLFLDDD
FDSD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgcttatggtcatcggtacgcgaactgtcgggctccggctactaccaga
tcggcacgccttcctccgtgcaggcattttctaaatgggtcttgcccatttggtcaaaac
tgtcgccattctcatgagcttccagcatggaagtcctctcaggtttgcagatatttccag
agagggggatgctggtttggtgaccgctgcagatatgaacatgtcctccaaactgatgga
agttttctggatagcagacgacggtctgcacctgttatccaccctgttttgagtggagaa
gcagcagagacccgtcgtggctcagagccatccattcagcaagtacatggtacctatgct
gggagtcgccgtgtgtccgaacctgctgttgcaagcctgcagagaaactttgagcgctta
agcacagaatatgaagagcctacagtggctgagtttgtcccaaggatacagcagccaaaa
ctggaaattctgagtgctcggtcaacactgcaggtccagaacggaacttcccaatgccac
acccgggcaaaatccacatctgcccatgtgccttataatcctgttgggaacatcacagag
gagaatgaagatttgaatggcttgcatgcttctaagcagggagaaaacgttgataccgct
gggtcccagtgcagaacacagaatgtaggtgtgacagcagcagaagcttatgagaggagt
aaagatgtgacctgtggcatttgtatggataaagtttatgaaaaacctgcacctgatgac
cgttgctttggcattcttcccaactgtaatcatgccttctgtctgagctgtattgtcaca
tggagaaagaccaaggacttccaggctgaagtcataaagtcctgtcctcagtgtcgcgtg
aagtctacttactacattccatacaagtactgggtcagtgatccagtccagaagcaaaat
ctgataagcaatttcaaggagaggtctgggaaaataaaatgcaagtttttcactcgccat
ggttgctgtccttttaagtcagagtgcatatatctacatgagatgccccagggtcacagg
cgcaggcggaggcgaagatctgcaacccaggcccggcgactgagctccgatgattccgac
agtgagggtttcaacattttgcagtatgccattgcacttgctctattacatgaggttgat
gatgaccttctggaggactatttccatcggcgttattttcaactgtttcttgatgatgac
tttgattcagactga
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