KEGG   Polypterus senegalus (gray bichir): 120526023
Entry
120526023         CDS       T08668                                 
Name
(RefSeq) transcription factor Sox-11-like
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psex03000]
    120526023
Transcription factors [BR:psex03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    120526023
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 120526023
NCBI-ProteinID: XP_039604785
LinkDB
Position
3:242512210..242515269
AA seq 361 aa
MVQQTEHGETESSMSREATDTEENEFIACSPLPLNPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSSSKPNAHSPEKSSSKISKTSGKKCSKLKPSKPGVKSQEYGDEYVFGNLKGNKTV
KNILTDEDDDEDYDDDLQMRLKQEDEEQMRVYGAAKVPASPTLSSSAESEGASMYEDVRN
AAQNRLFYNFKNITKQSVAYPASVSPASSRSVSTSSTSSEEPDDLLFDFSLNFAQSSQGS
ELGNTNSGNLCLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFT
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggtgcagcaaacggagcacggagaaacagaaagcagcatgtccagagaggctactgat
actgaagagaatgaatttatagcttgcagccctcttcctcttaaccccgactggtgcaaa
acggccaccggccacatcaagcgacccatgaacgcatttatggtgtggtcgaagatcgag
aggagaaagattatggagcagtcgccggacatgcacaatgccgagatatctaaacgactg
ggaaagcggtggaaaatgttaaaggacagcgaaaaaattccttttatcagggaagccgaa
agacttcgcctcaagcacatggctgattaccccgattacaagtacagaccgaagaaaaag
ccaaagctcgacagttcctcctcaaagccaaatgcacattcaccggagaaaagcagcagc
aaaatttctaaaacctccggcaaaaaatgcagcaaactaaagcccagcaaaccgggtgtc
aaatcgcaagagtatggggacgagtacgtatttgggaacctaaaaggcaacaagactgtt
aaaaatattcttaccgacgaagatgacgatgaggattacgatgacgacctacagatgcgc
ttaaaacaagaggatgaggagcagatgagggtttacggcgcagcgaaagtgccggctagt
cccactctcagctcgtccgccgagtcggaaggcgccagcatgtacgaagacgtgaggaat
gctgcccagaacagactcttttacaatttcaaaaacatcaccaagcagagtgttgcttac
ccggcgtctgtctcaccggcatcctcgcgatctgtctccacgtcgtccacttccagcgag
gagccggatgatttgctttttgacttcagcttgaatttcgctcagagctcccagggatcg
gagctgggcaacaccaattcaggaaacctgtgtctgtctctggtggataaggatttggac
tcgttcagtgagggcagtttgggctctcattttgagtttccagattactgtaccccggag
ctcagcgagatgatcgcgggtgactggctcgaggcgaacttttcagacttggtgttcacg
tactaa

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