Polypterus senegalus (gray bichir): 120526041
Help
Entry
120526041 CDS
T08668
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120526041 (taf1b)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120526041 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
120526041
NCBI-ProteinID:
XP_039604819
LinkDB
All DBs
Position
3:247363655..247566991
Genome browser
AA seq
594 aa
AA seq
DB search
MDDEHVRDYTEPCPCCSEVNWGITDEGKFYCQSCHTVIERSKEVTSADTFTPSARISSVS
RGIRGKRKVEQGRLWYLCEGFQFILTQQADAIKALGVCDQFKDKILCTLWHLYLHKSQQA
YTNKPIQSKFKECYQLLGSGSESSTINELSSFSESENGSRSPDENSDIASESKVSSLSDF
DDNTSLFSGSIDGSLYKSFRKGNQMYMSMPMTLAFCYLSLLWLRESMTLSELLKYVADGQ
IPYLNMNQFFPEEIKLYGMDLHIFYVQKIPTYNSVQQCMVRLAWFLGLPGFPQITEHCYF
HPNILCIKYLMEANLPDEMHTWICRLAFKTGISNVASLTFNPTTKQAKPIYYEVKACALI
IVMLKLLFQLDDVREWCLSEKAETYNMKTKDVQCFNFQKWYETMSQALEEAKQKEKEKIA
RKSWKLEKPFYYIPKQKYLILKKRRFVNNLEDQFAKLSGSEKVSPTPVTSSFQFVWNNER
GRKPCFHGHTLNFLISKESKRYTFLDTNYWYTPSQICKQGSCQGHFYLDEERLPKSCLFV
LSLFCFLLKVEMSTLYQEVSRIEQKLLQSKGKKKSSQRNPKAPTTCKSLDGGKE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaacacgtacgagactacacagaaccgtgtccttgttgcagtgaggtcaac
tggggtatcaccgacgaaggcaagttttactgccagtcctgtcacacggtgattgagaga
tcaaaagaagttacttctgcagacacatttacaccatctgctcgaataagctctgtgtct
agaggaatccgaggaaaacggaaagtagaacaaggacgcctgtggtacttgtgtgagggt
tttcagtttattttaactcaacaagctgatgctatcaaagcccttggagtctgcgatcaa
ttcaaagataaaattctttgtacattgtggcatctatatctgcataaaagccaacaggcg
tatactaataagccaatacaaagtaaattcaaagagtgctatcagctactgggcagtgga
tcggaatccagtactatcaatgaattgtcctctttctctgaaagtgagaatggaagcaga
tccccagatgagaactcggacattgcttcagagtccaaagtttcatcgttgtcagatttt
gatgataatacatctctgttttctggttccattgatgggagcctttataaatcctttagg
aagggaaatcagatgtatatgagtatgccaatgactctggctttttgctatctatctttg
ctgtggcttagagagtctatgacactgtctgagcttctgaaatacgttgctgacggacaa
attccttatctcaacatgaaccagttttttcctgaagaaattaaactttatggcatggat
ttacatatattttatgttcagaaaattcctacatataattctgtacagcagtgcatggtt
cgtttggcttggtttctgggtttgcctgggtttccacaaattactgaacactgttatttt
catccgaacatcctttgcataaagtatcttatggaagccaacttaccagatgaaatgcat
acctggatttgccgcttggcattcaaaactgggatttcaaatgtggcctcactgacattt
aacccaactactaaacaggcaaagccaatctattatgaagtaaaagcttgtgccttaata
atcgtaatgttaaaactgctcttccagctggatgatgtgagagaatggtgtttatctgaa
aaggcagagacatataatatgaaaacaaaagatgtacagtgtttcaatttccaaaagtgg
tatgaaacaatgtcacaggccttggaagaggcaaaacaaaaagaaaaagaaaaaatagcc
aggaaatcttggaaactggaaaaacctttttactatataccgaaacagaaatatttaatc
ctcaaaaaaagacgttttgtaaacaaccttgaagatcaatttgctaagctttctggatct
gagaaggtctctcccactccagttacttctagctttcagtttgtctggaataacgagaga
ggacgaaagccatgttttcacggacacactttgaattttttaatcagcaaagaatcaaaa
cggtatacgtttctggataccaactactggtatactccttcccaaatctgcaaacaaggg
tcttgccaggggcatttctacttggatgaggagaggctgccgaaaagttgcctatttgtg
ctcagtttgttctgcttcttgctgaaagtagagatgagtactttatatcaggaagtgtcc
cgaattgaacagaagttacttcaatcaaagggaaaaaaaaaatcttcacagagaaatcca
aaagctccgaccacttgtaagtcactggacggaggaaaagagtag
DBGET
integrated database retrieval system
