Polypterus senegalus (gray bichir): 120526132
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Entry
120526132 CDS
T08668
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120526132 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120526132 (nfasca)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
L1 family
120526132 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Herpes_gE_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
120526132
NCBI-ProteinID:
XP_039605019
LinkDB
All DBs
Position
3:complement(265434222..265709604)
Genome browser
AA seq
1388 aa
AA seq
DB search
MMSQTCRVAIFLLLCWEAVSIEVPLDPKIQQELKQPPTITKQSPKDYIVDPRDNIIIECE
AKGNPLPSYTWTRNRKFFNVAKDPRVTMRRNSGTLEIGFRSGGRPDEYEGEYQCFAKNEF
GTALSNKILLRVSKSPLWPKEYLEPVVVNEGSHAILPCNPPPGLPPPHIFWMNSAMLPIT
QDRRVSMGLNGDLYFSNVLAKDAETDYSCNARFHFTHTIQQKNPFTLKVLTKESRNDTSV
HFSLNLTELHSARGITETTPTFLSPTGTSSSKTVLRGDELLLECIAAGVPTPSITWYKKG
GDLPSKKVKFENFNKTLRIVGVSEADAGDYSCLASNKMGSIRHTISVRYKASPYWLSEPK
NLILAPEEDGNLICRANGLPKPEITWLINGDPIESAPPNPSRRVAGDTIIFRSVQIGSSA
VYQCNASNEHGYLLANAFVNILDVQPRMLAPQSEVIRVIENNRTHLDCPFFGSPLPMLRW
FKNGQGSNLDGGQYRTYDNGTLEIKRARKEDQGTYTCVATNILGKAEKQVRLEVKDPTRI
VRAPENLVIKRGENARFDCRISYDPSLRLIVTWLKDDNPLSGWRTLVQTISNWFKEVESM
FYPRMKKDEESLTVTNVNEQDEGVYTCIVSTELDSDSAKARLTVQDDPTSRIVPEIKDRP
EPPTDLELTDPSERSVRLTWVPGDDNHSPIKEFLVQYEEDLWERGKWKNLTSYPGNLNSV
ILPLSPYVNYQFRVIAINEIGASRPSRPSERYRTSGAPPEVYPQKIRGAGSRKNNMEITW
EPVVGTDQNGPNLRYMVWWRRRDSREQWKNLTTRYEKHVIWDTDTYVAYEIKVQAINDFG
PGPESPIIIGHSGEDYPRSAPTNIRIRPDSTRAIIMWSPVSYESVQGELKEYRVYYWRES
SKLKGLSVSREKKYQSFSTTSSKPQGTLKDLIPYSNYKLYMVVVNGKGEGPSSTTHDLQT
SEGVPGPPRYLRVQERNMDTIYLDWDQPLEPNGILTGYTLKYRTVNGTKVGRMQTENFQS
NITSYTLRKADRNARYKFDLSARTQIGLGEAYIVDVTQSTNEEEMNATASVIPSFFPLIT
TATVLVDSATPVEMTPSAVPTTVETTTTVISPTTVIPPTTVIPPTTKSPLSAVTQVHVFA
RGSKIWNVTVSPNTNYANISWTHNFPPDSTEFVIEYIDSNETVTNVTVKHETPVKLAGLI
AGAKYRVRVYSREFTSVSSKYVSFETSSAYTKDQVDIATQGWFIGLMCAIALLVLILLIV
CFIKRSRGGKYPVREKKDLPLDAVDQKDQDGSFDYRSLERLDRATTLPYRKRDEDNKPLQ
GSQTSLDGTIKQPDSEDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSP
VNAIYSLA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacagacgtgcagggtggcaatcttcctcttgctctgctgggaagcagtaagc
attgaggttccccttgatccaaagattcaacaagagcttaagcaacctccaacaatcaca
aagcagtcacctaaagactacattgtggaccccagggataacatcataattgagtgtgaa
gctaaaggaaacccccttcccagctacacatggacacgtaacagaaagttcttcaatgtg
gcaaaagatcctcgtgtaacaatgagacgtaattctggtacactagagattggttttcga
agtggagggcgtcctgatgaatatgagggagagtatcaatgttttgctaagaatgaattt
gggactgcactctccaacaaaatcttgctccgtgtttcaaaatcgccactttggcccaaa
gagtacctggagccagtagttgtcaatgaaggctctcatgccattctgccatgtaatcca
ccgcctggcctcccaccacctcacatcttttggatgaatagtgccatgttacccatcact
caggatcgacgagtctcgatggggctgaatggagacttgtatttctccaatgttctagct
aaggatgctgaaacagactacagctgtaatgcccgttttcatttcacacataccattcag
caaaagaatccattcactctgaaagtattgaccaaggaaagccgtaatgatacatcagtg
cacttctcgttgaacctcactgagttacacagtgcacgaggcatcacagagaccacaccg
acatttctctcccctaccggaacatctagttctaagactgttctgcgtggtgatgaactg
cttctggagtgcattgcagcaggagtacctactcctagcattacctggtacaagaaagga
ggagaccttcccagcaagaaggttaagtttgaaaacttcaataagacattacgcatagtt
ggggtgtctgaagctgatgcaggtgactactcctgcctggccagtaacaaaatgggcagc
attcgtcacaccatctcagttaggtacaaagcttcaccatactggctgtctgaaccgaaa
aatctgatccttgctccggaggaggatggaaatcttatttgtcgagcaaatgggctgcct
aaaccggagatcacatggcttatcaatggagatcctatagaaagtgctcctccaaatcca
agccgtcgtgttgcaggcgacaccatcattttccgttctgttcagattggtagtagtgcc
gtttatcagtgcaatgcttcaaatgaacatgggtacttgttagctaatgcttttgtcaat
atcctagatgttcagccccgcatgctagctccacagagcgaggtcatcagagtgattgag
aacaatcggactcatttggactgcccattttttggctctcccttgcccatgctacgttgg
tttaagaatggtcagggaagcaacttagatggaggacagtaccgcacctatgacaatgga
acattagaaatcaaacgggcacggaaagaggatcagggcacctacacgtgtgtggcaacc
aacattttgggcaaggctgagaagcaagtcaggcttgaagtaaaagacccaacacgcatt
gtgagagccccagagaacttggtcataaaacgtggggagaacgctcggtttgactgtcga
atctcatatgacccctctcttcgcttaattgttacctggctcaaagatgacaaccccctg
tctggctggagaactttggtacagactataagtaattggttcaaggaggtggaaagcatg
ttctacccaaggatgaagaaagacgaagagtcattgacagtcaccaatgtcaacgagcaa
gatgagggagtttacacctgtattgtgagcactgaacttgattcagattctgccaaagcc
cgccttactgtccaggatgatccaacttctcgcattgtgcctgaaattaaagaccgccca
gagcccccgacagatctagagctcacagacccctcagaaaggagtgtgcgactaacctgg
gttccaggagatgacaaccacagtcccataaaagaatttcttgtgcaatatgaggaggat
ctttgggaacgtggaaagtggaagaatcttaccagctatcctggaaacctcaactctgtc
attttgcctctgtccccatatgtaaactatcaatttcgagtcattgccatcaatgagatt
ggtgctagcagacctagtcggccatctgagcgctatagaaccagtggagcaccgcccgaa
gtgtaccctcaaaagatacgtggtgctggatcaaggaagaacaacatggaaattacctgg
gagcctgtagttggaactgaccaaaatggacccaacttacgttatatggtttggtggcgt
cgaagagactctcgggagcaatggaagaacttaactacgcgctatgagaaacatgttatt
tgggacacggacacgtatgtcgcctatgaaattaaagtacaagcaataaatgactttgga
ccaggacctgaatcacctataatcattggccattctggagaagactaccccagatcagct
ccaaccaatattcgtatccggccggatagcacaagggccatcattatgtggagtccagtc
tcatatgaaagcgttcaaggagagctaaaagaatatagggtatactactggagggaaagt
agcaagctcaaagggctgagtgtatcaagggagaagaagtatcagagtttctcaaccaca
agctccaaaccccaggggacactaaaagacctcattccatatagcaactataagctgtac
atggtagtagtcaatggcaagggagagggtccatcaagcacaacccatgatctccagacc
agtgaaggagtgcccggtcctccaaggtatctgcgagttcaggagcggaatatggacacg
atttacctggactgggatcaaccattagagcccaatggaattttaactgggtatactctg
aaataccgaacagtgaatggaaccaaggtgggacgtatgcagactgaaaacttccaatca
aacataactagctacacattacgcaaagctgaccgaaatgcacgctacaagtttgatttg
agtgctcgcacacagatcggcctaggggaggcatatatcgttgacgttacccagtctacc
aatgaagaagaaatgaacgccacagcctcagttattccctctttctttccattgataacc
actgcaacggttctggtagattcagcaacccctgttgaaatgactccttcagcagtgcct
acaacagttgaaactacaactacagttatttctccaactacagtcattccgccaactaca
gtcattcctccgacaactaagagtcctttgtcggctgtcactcaagttcatgtgtttgcc
cgtggcagcaagatctggaacgtgactgtctcgcctaacactaattatgcaaatatcagc
tggacccacaacttccctccggactctacagagtttgtgattgaatacattgacagtaat
gagacggttaccaatgtgactgttaaacatgaaacccctgtcaagctagcaggactgatt
gcgggggccaagtaccgggtgcgagtttactcccgagaattcacctctgtcagcagcaaa
tatgtctccttcgagaccagctcagcatacaccaaggaccaggtagacattgccacccaa
ggatggttcataggcctaatgtgtgcaattgccctgttggtgctgattcttctcattgtc
tgcttcataaagaggagccgtggaggcaaatacccagtgagagaaaagaaggatcttccc
ttggatgccgttgaccaaaaggatcaggatggatcttttgattaccggtcccttgaaagg
ttagaccgtgctacaacacttccttatcgtaaacgtgacgaggataacaagcctctgcag
ggcagccagacatctctggacggaaccattaagcagccagacagtgaggacagcttggtg
gactatggagaaggaggagatggacagttcaacgaagatggttctttcatcggccagtac
actgtcaagaaggacaaggaggagacggaaggcaatgaaagctcagaggcaacctctcct
gtcaatgccatttattctttagcatag
DBGET
integrated database retrieval system
