KEGG   Polypterus senegalus (gray bichir): 120526301
Entry
120526301         CDS       T08668                                 
Name
(RefSeq) lysine-specific demethylase 5B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psex01009]
    120526301
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120526301
Enzymes [BR:psex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120526301
Protein phosphatases and associated proteins [BR:psex01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120526301
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120526301
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD-1st_NSD PHD_4 zf-PHD-like
Other DBs
NCBI-GeneID: 120526301
NCBI-ProteinID: XP_039605354
LinkDB
Position
3:290263953..290356696
AA seq 1575 aa
MSQARPRPRPDEFIPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKIRPPPDWQPP
FACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYHL
NKLVVEEGGFDAVCKDRKWTKIALKMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLA
PEPPTKLMSLGAEKTLDKCVQKPTLTNDVKDKEYKPHDIAQRQSVQLSDSTTPARRAKRM
RAEAGCVKVEPGEVCDYRPNLRRRMGSVVTKNEFEKDYFPLVKQEPIETAVDQYEKPKAR
HKKPPPAVSIVDLYVCLVCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC
LAQECSKPQEAFGFEQAYRDYTLRAFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVST
IEEDVTVEYGADIASKEFGSGFPVRGGRFKLAPEEENYLDCGWNLNNMPVMDPSVLTHIT
ADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK
LAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNF
AEAVNFCTMDWVPLGRQCVDHYRLLHRYCVFSHDEMICRMASKAESLDVVLASTIQKDMA
IMIAEEKVLRDKVRKMGIIHSDTEEFDLLPDDERQCARCRTTCFLSAITCPCSPGVLVCL
FHAEDLCPCPVKNYTLKYSYTLDDLYPMMNALKQRAESYDEWASNVTEILEAKLDQKRSL
EEFQSLMKESERRNFPDNDLLRHLHLVTQDAEKCSTVAQQLLNGKRQTRYRAGGGKSQNQ
LTVEELRAFIKQLYTLPCSISQTSLLKDLLSRIEDFQQRSEKILLEEVPCVSEVQELLEV
SVDFDVDLPQLPMLRERLEQGRWLQEVQQASAEPSVLTLDDMRRLIDLGVGLSAHPSVEK
AMARLQELLTISELWEDKAKSLLKSRTHHAVETLAAAVEEVDNIPAYLPNCLLLKESVQK
AKQWLQEVEALQLGGRVAVLDTLTDLVTRGRLIPVQLDPLARLESLVSEVQAWKECAAKT
FLGKNSPFTLLEVLCPRCEFGVVGLKRKPKKAKDAPPCGKKKVTKLESVGDVERALSESK
DSASAMATLGEVRLKELEILNALRAFNEAKLLPSTDNASIKVCLCQKPPSGSMFQCELCR
DLFHSGCVTVPNSVVQQGSQAWLCPLCHHSEKPPLEKILPLLASLQRIRVRLPEGDALRY
MIERTVSWQHRFQQVFSSRNLPSLHERAGPSPSHHQGALTPSENNGKANPTGSLTQESVK
TSELPAAYCIEQKSISLQGLSSDLEELMVEALLLQVSLPEIHELYQILQTGLTSPCLSEH
TSEALHNCDRPGSRSPNSQGRSPSRNELGSCNLKKDPLNSADRKQKRRLDKDGFIIEKKE
RLKKPFMPQKKKMKLQKETLRDVSKPAGEPRQQTDSPTMLSDLSYSDDSEEDIAICPAEE
CQQPEGEELSEIQEVPLMQGSSELEETSLQVDWVQCDGSCNQWFHQVCVGVSAERAEKED
YICINCTVREGQGRK
NT seq 4728 nt   +upstreamnt  +downstreamnt
atgagccaagccaggcctcggccccggccggacgagttcatcccaccaccggagtgcccg
gtcttcgaacccagctgggaggaatttgctgacccgtttgctttcatcaacaagatccgg
cccatcgctgagaagacgggcatctgtaagatccgcccgccgccggattggcagccccca
tttgcttgcgatgttgacaaactgcacttcaccccacggattcagaggctgaatgaattg
gaggctcagacaagagtgaagctaaacttccttgatcaaattgccaagttctgggagctg
cagggatgcacgttaaaaattccacacgtggaaaggaagatcttggacttgtatcattta
aacaagttagtggtggaagaaggaggatttgatgcagtctgcaaagacaggaagtggacc
aaaatagcactaaaaatgggatttgctcctggaaaggcagttggttcccatattcgagcc
cactatgaaaggattctttatccatacaaccttttccagtctggagctagccttctggct
cctgagcctcccaccaaactgatgtctttgggggcagaaaaaacactggacaagtgtgtc
cagaaacctaccttaacaaatgatgttaaagacaaggaatacaagcctcatgatattgcc
cagcgtcagtctgtgcagctaagtgacagcaccactcctgcccgtcgggccaaacgcatg
agagctgaagcagggtgtgtgaaggtggagccaggagaggtatgtgattaccggcccaac
ctgcgcagaagaatgggctcagttgttacaaagaacgagtttgaaaaggattacttccct
cttgtgaagcaagagcccattgagactgctgttgatcaatatgaaaaacctaaggcacga
cacaagaagccccccccagcagtgagtatagttgacctgtatgtctgtctggtatgtggg
agtggaagtgatgaggaccgcctactcttgtgtgatggctgtgatgacagttaccacaca
ttctgtctaatccctcctctgcatgatgtgcctaaaggagattggaggtgcccaaagtgt
ctggcacaggagtgcagcaagccacaggaggcctttggctttgagcaggcatacagagat
tatacactgcgagcttttggagaaatggcagatgctttcaagtcggattattttaatatg
ccagttcatatggtacctaccgaattggtagagaaagaattctggcgtttagtcagcacc
attgaagaagatgtcacagtggagtatggagctgatattgcatccaaggagtttggaagt
gggtttcctgttaggggtggtcgatttaaattggcccccgaagaggagaattatctggac
tgtggttggaacttgaacaacatgccagtaatggatccttctgtccttacccatatcact
gctgatatctgtgggatgaagttgccctggctgtatgttggcatgtgcttctcttcattc
tgctggcatattgaggaccactggagctactcgatcaactatctgcattggggggagcca
aagacatggtatggagctccaggatatgctgcggagcaacttgaagatgtcatgaaaaaa
ctggctccagagctttttgagtcccagcctgacctcttgcaccagcttgtcaccatcatg
aatccaaacactttgatggctcatggagtaccgatttaccggacaaatcagtgtgcgggg
gagtttgtgatcacattccctagagcataccacagtggcttcaatcagggcttcaacttt
gcagaggctgtcaatttctgcaccatggactgggttccattgggccgccagtgtgtggat
cattaccgtctccttcatcgctactgcgtgttttcccatgatgagatgatctgtaggatg
gcttcaaaggcagagtccctagatgtagttctggcgtcaactattcagaaagatatggca
atcatgattgctgaggaaaaggtgctgcgggataaagttagaaaaatggggattattcat
tctgatactgaggaatttgacttgctgccagatgatgagcgacagtgtgccaggtgccga
accacctgtttcctgtcagccattacgtgcccctgcagtcctggagttttggtgtgtctc
tttcatgctgaagacctgtgtccatgtcctgtaaagaattacaccctcaagtatagttat
acactggatgatctttaccccatgatgaatgctttaaaacaacgggcagaatcatatgat
gagtgggcttcaaatgtaacagaaattctggaggctaaattggaccaaaaaagaagttta
gaggaattccagtcacttatgaaagaatctgagcgaagaaactttcctgacaatgacctg
ctacgacatctacacctagtgacacaggatgcagagaagtgttccactgtcgcacagcag
ctgctaaatggaaaacggcaaaccaggtaccgtgcaggtggaggaaaatcacaaaatcag
cttacagtggaagaactccgtgcattcatcaagcagctctatactctgccctgcagcatt
agtcaaacatctttgttaaaggacctgttaagccgtattgaagatttccagcagcgcagt
gaaaaaatactattggaggaagtaccctgtgtgtcagaagtccaggaactgctagaagtg
agtgtggactttgatgttgacctgcctcagctacctatgttgcgggagaggcttgagcag
ggtcgatggctacaggaggtgcagcaggcctctgctgagccttctgtcctgactcttgat
gacatgagacgacttatagaccttggagtaggcttgagtgcgcacccatctgttgaaaag
gcaatggcccgccttcaagagcttttgaccatctctgagctttgggaagacaaggctaaa
agtctcctgaaatcaagaacacatcatgctgttgaaactctggctgcggctgttgaagag
gtggacaacattcctgcatacttacctaactgtttgctgctgaaagaatctgttcagaag
gccaagcagtggctccaggaggttgaggcattacagcttggtggccgagtggctgttttg
gacactctgaccgatcttgtaacaaggggccggttgatcccagttcagcttgatcctctg
gcaagactggagtctcttgtctctgaggtccaggcttggaaggagtgtgcagctaaaaca
ttcctaggaaaaaactcgcccttcactcttttagaggtgttgtgtcctcgatgtgaattt
ggagtagtgggactgaagaggaaaccaaaaaaggcaaaagatgctccaccatgtggtaaa
aagaaagttaccaagttggagagtgttggagatgtggagagagctttatcagaaagcaag
gattcagcctctgctatggcgactctgggtgaggtccgattaaaggaactggaaattctc
aatgcccttcgagcttttaatgaagccaagttgctcccatccacagataatgcatccatt
aaagtttgcttgtgtcagaagccaccctctggtagcatgtttcagtgtgaactgtgcaga
gatttgtttcacagtggctgtgttaccgttcctaactccgttgtccagcagggctcccaa
gcctggctgtgcccactgtgccatcattctgaaaagcctcccctagagaagattctgcct
ctcttagcttccctgcagcgcatcagagtgcggctcccagaaggtgatgctctacgatat
atgattgaaagaactgtgagctggcaacacaggttccagcaggtgttttcctctcgtaat
ttaccttccttacatgagagagctgggccttccccaagccatcatcaaggtgcattgact
ccatctgaaaataatggaaaggccaatcctactgggtcgttaacacaggagagtgtcaaa
accagtgaactaccggcagcttattgcattgaacaaaaatcaatttctcttcaaggctta
agctctgatttagaagagctcatggtggaggcacttcttctgcaggtgtctttgcctgaa
atccatgagttgtatcaaatcttgcaaacagggctaacatctccatgcttgagtgaacat
acctcagaggcactgcacaactgtgaccggccagggagcaggtcgcccaactctcaggga
agaagcccatcaagaaatgagcttggctcctgtaatctgaagaaagaccctctaaattcg
gcagaccggaagcagaagagacgtttagacaaggacgggttcataattgagaaaaaagag
cgtctcaaaaaacccttcatgccacagaagaagaagatgaagctccagaaggagacattg
agggatgtcagtaaaccagcaggagagccacgccagcaaactgactcccccactatgctc
tctgacctatcatattccgatgactctgaggaggatattgcaatctgtcctgccgaagag
tgccagcagcctgaaggagaggagctgtctgagatccaggaagtacccctgatgcaaggt
tcatccgagctagaagaaacttctttgcaggtagactgggtccagtgcgatggcagctgc
aaccagtggtttcaccaggtctgtgtaggagtgtcagctgaacgggctgaaaaggaggac
tatatttgcatcaactgtactgtaagggaaggccaaggcaggaagtaa

DBGET integrated database retrieval system