Polypterus senegalus (gray bichir): 120526341
Help
Entry
120526341 CDS
T08668
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120526341 (ddx20)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120526341 (ddx20)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
120526341 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
120526341
NCBI-ProteinID:
XP_039605429
LinkDB
All DBs
Position
3:298585485..298643651
Genome browser
AA seq
800 aa
AA seq
DB search
MAARVQKTAHDVPSRRRTDDVFLADKIDFSSLLLSETVQLGLAAAGFQRPSPVQLKAIPL
GRCGLDLIVQAKSGTGKTCVFATIALDSLVLENPSTQVLILAPTREIAVQIHSVITAIGV
EMEGMECHVFIGGTPLSQDRARLKKCHVAVGSPGRVKQLIELGYLSTTGVRLFVLDEADK
LLEEGSFQDQINWIYSSLPVNKQMLALSATYPASLEEHLTRYMRDPAFVRMNPTDPGLIG
LKQYYKLVKSHPLPHKIFEEKVQHLLELFGKVPFNQALVFSNLHSRAQHLADILTSKNLP
AVCISGGLTQEQRMEAMSRLKQYKCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTLGLAVTYCCLGEEENEMLAIAQKCNLDLHCLPDPIPPGLMEEPCDFAVCV
ENSPNVPEQMQLSGKAVHIQESVSEDFFSTRRSAPGKAGRKADKRKQTKNGTSRAEQLHG
QDGGKTNGRVTEKTPSLGNNSESLSQVNSGQMVSSLFNRQHQSLTDLEKKAQQDALPKIP
SLPSFKIKKSPRSSILSFAKLVEDYEQFIRYGPGRTVEIRRHCAGSGTNGSEEVADEVCF
QSSEDQRACQAQDSVEHLRDRASSSSSPGRPSSPSSESTMSNKDDSSETEEDGSKNMEVT
ISSKKETSASNTAADKMPKTNPTEACIPKNTDSEPARTSSTKYRSAPETRTVQYQEDAKS
TRQVRVSSAAKKQPGQHGYQRPSSKQASRESRSASSMQDDYWTQYYKAWRMYHPPHLRAY
LNWMNAYHMNLVYMQELMRR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcgtgcagaaaacagcgcatgatgtccccagccgccgtcggactgacgat
gtgttcttggctgacaaaatcgactttagttctctgctgctttccgagactgttcagctg
ggtctcgctgctgcgggcttccaaaggccgtcgcccgtgcagctgaaggcaattcctctg
ggtcgctgcggactcgatcttattgtacaagctaaatcaggaacagggaagacatgcgtg
tttgccacaattgcactggactccttagtcttggaaaatccttccactcaggttctgatc
ctggccccaacccgtgagattgcagtgcagattcattcagttatcactgctattggcgtt
gaaatggaaggcatggagtgccacgtttttattggcgggacaccactaagtcaagaccga
gcaaggctgaagaaatgccatgtggctgttggctcaccgggtcgggtgaaacagctgatc
gagctcggctacctgtcaacgactggtgttcgcctgtttgtactggatgaagcagacaag
ctcctggaagagggcagttttcaagaccagatcaactggatctactcctctctgcccgtc
aacaaacaaatgctggcactatcggcaacatacccagcatccctagaggagcatttgaca
cggtacatgagggatcctgcatttgtgaggatgaaccccacagatcctgggctcattggg
cttaagcaatattacaagcttgtgaaatctcaccctctgcctcacaagatctttgaggag
aaggtgcaacatctcctggagctctttggcaaggtcccatttaaccaggctctggttttc
tccaacttgcacagcagagctcaacacttagctgatatcctcacctcaaagaacctccca
gccgtgtgcatctctgggggtctgactcaagaacagagaatggaagctatgtccaggctg
aagcagtacaagtgtcgtgttctaatttctacagacctgacgtctcgaggaatcgatgca
gataaagttaatctcgtcataaatctggatgttcctcaggactgggaaacctacatgcac
cgcattggaagggctggtcgttttgggacccttgggttggccgtgacatactgttgtttg
ggagaagaggaaaatgaaatgttggcaattgctcaaaagtgcaacttggatctccactgc
ttgccagatcctattcctcctggattaatggaggagccctgtgactttgcggtctgcgtg
gagaattcgcccaacgttcctgagcaaatgcaattatctggcaaagcagttcatattcag
gagagcgtgtcagaagatttcttttccacacggcggagtgctcccggaaaggctggaaga
aaagcagataagcgtaagcaaacaaaaaatggaacttctagagccgagcagttacatggc
caggatggtggtaagaccaatggcagagtgacagaaaagaccccatcactgggtaacaat
tcagagtctctgtctcaggtaaactcgggtcagatggtttcctcactgtttaataggcag
caccaaagtcttactgacttggaaaaaaaagcacagcaagatgcattgccaaaaatccca
tcgttgccatcatttaaaatcaagaagtctcctaggtcctcaatcttgagctttgccaaa
ctggttgaagactatgagcagtttatcaggtacgggcccggaagaacagtggagattaga
cgtcattgtgctggctcgggcacaaatggctcagaggaggtagctgatgaggtctgtttt
cagagtagtgaggatcagcgagcctgccaggcccaagactctgttgaacacctccgtgac
cgagcaagcagcagcagctctcctggtaggcctagctccccgagcagcgagtcaaccatg
tccaataaagatgactccagtgagacggaggaggatggctcaaaaaatatggaagtcact
atctcatccaaaaaagagacctccgctagtaacacagcagcagataaaatgcctaaaaca
aatcccactgaggcctgtattccaaagaatacggactcggaaccagcaagaacctctagc
acaaaatacaggtctgctccagagactcgaaccgtgcagtaccaggaggacgccaagtca
acccgccaggttcgtgtttcctctgctgctaagaagcagccagggcagcatggctaccag
agaccgagttccaagcaggccagccgggagagccggtcagcgtcttcaatgcaggacgac
tattggacgcagtattacaaggcctggcggatgtaccacccgccacatctccgcgcttac
ctgaactggatgaacgcctaccacatgaacctggtgtacatgcaggaactgatgaggcgc
tga
DBGET
integrated database retrieval system
