Polypterus senegalus (gray bichir): 120526409
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Entry
120526409 CDS
T08668
Name
(RefSeq) transcriptional-regulating factor 1-like isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120526409
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
120526409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
Myb_DNA-binding
zf-C2H2
zf-C2H2_4
Zn_SUZ12
Zn_ribbon_TFIIS
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
120526409
NCBI-ProteinID:
XP_039605503
LinkDB
All DBs
Position
3:306126126..306183712
Genome browser
AA seq
1176 aa
AA seq
DB search
MGDQSLYKANHVVNCTESSYYQLPPTSVAAGAGGLNHSYGSTVMETPQASPVSSAFPHDT
GKNYPELIETTKTGGSWPSAGNHLRNSLGNAGVMWAASGQGEALPAAEGAPYQYSCTQQA
EGPAKLDPAVQKLDSFTQVFASQNLRIHQGAGGGGLLAHAQPLGTSLADATTDSALRQLL
SQKPQVLESAPSQLKFQQQQPFDDGQAKAQAMHELQHHHHRHPHHHHHPHPHQQLYYEYQ
QQQQQQQQHQQRAAQLQQLQHVLQQRQQQILQQQAQQAQQAQQAQQAQQQSQQQFYLQQT
QTTTAQQQQQQQQTTLSGHALLQQLQQQQQQRHAYYQQQANLLQLQQQQMHAPTPAVPFH
QSRKGVGQAGQAYGPQEQGHVGQHVQMSPAQSQYFYQEQPPQYCHVYQQSVHLQQAQQQA
QQTPVQEELHSPTKHFQAESSCATVVSEVRDSSVNQKGTHPSMSAPSQTGQRALGEMLPT
VQLVSIKSEIQEEQQPQQQQQPPAGTLWSQVMLNDMKPEATSPDDSTLASPTFLDRTEVK
SKLVCAICFKEFKSLPALNGHMRSHGGMRASPSLKPEDGDKQLPKEVDAHLPIVMPVSVP
VKLLPAAAMLRQPTDANQLAADHVDRSAQLPAPPGPPCQRPLGPPHGCSDAPRKLTKAEK
PDKRGQHEKKKYKHRPEPLIIPPPSLTLSVGNATLFQSQLRSPRLLGEPPPYTPPPMLSP
VRQGSGLFSSVIQHSQSTKAASPITPRVYLGRSSGADGLSVSVTPGLGEQLANIEPHINL
GRQYQAEIPRLQSRSKMASDDHRASLVWTNRPEFESASGQQKVDNLVNMACSSVLPGGGT
NSEYALHCLFETQGDFLATVEKLLMLKTTRQASHPLAGYHYAGSDQWTPLEKKMLKKALV
IHNKDFFLVQKMVKTKTVSQCVEFYYTFKKRMHLGRKHRSRLMSAEEEEQLTNQNENTEL
DEVEEEKKSAQEEQQDTAMVDVSPDDRVTAPEEPAPVESAALANMSSFSFPCEMPNCGAV
FTSRQALNGHGRIHGGTTQQVKLVLGSKMKVGSQSDYSSVKGSPAHSTTSGDTDPTLLFP
CKECGKVFFKIKSRNAHMKTHKQQDDQEHKKVLHMPAMKLPSSLSQVSRHHVMLPLDHMG
LVKRQGLDEEDEDPLLSSHLLLDDDHGGYLRDDDEL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagtcactctacaaggccaatcacgtagtgaactgcacagagagcagctat
taccagctgccacccacctcggtggcggccggggccgggggcctgaaccacagctatggc
tcgactgtcatggagaccccccaggcctccccggtgtcctctgcgtttccccatgacacg
gggaagaattacccagaactgatagagaccaccaaaaccggcggctcgtggcccagcgcg
ggcaaccaccttcggaacagtctgggcaatgccggcgtgatgtgggccgcctccggccag
ggcgaggcgctgcccgccgcagagggcgccccctaccagtacagctgcacgcagcaggca
gaggggccggctaaactggaccccgcggtgcagaagctcgactccttcacgcaggtgttt
gccagccagaaccttcggatccaccagggcgccggcggcgggggcttactggctcacgct
cagcccctgggcacctccctggccgacgccaccacggacagcgccctccggcagctgctc
tctcagaagccgcaagtcctcgagtcggcgccgtcacagctcaagttccagcagcagcag
ccctttgacgacgggcaggccaaggcgcaggcgatgcacgagctgcagcatcatcatcat
cgtcaccctcatcatcatcatcatcctcaccctcatcagcagctgtactacgagtaccag
cagcagcagcagcagcaacagcagcaccagcagagggcagcgcagctccagcagctccag
cacgtcctgcagcagcggcagcagcagatcttacagcagcaggcgcagcaggcacagcag
gcgcagcaggcacagcaggcacagcagcagagccagcagcagttctacctgcagcagacg
cagaccaccacggcacagcagcagcagcagcagcagcagaccaccctgtccggccacgcc
ctgctgcagcagctgcagcagcagcagcagcaacgccacgcctactaccagcagcaggcc
aacctcctccagctgcagcagcagcagatgcacgcgcccaccccggcggtgcccttccac
caaagccgcaaaggcgtcgggcaggccgggcaggcctacggccctcaggagcagggccac
gtcgggcaacacgtccagatgtcccctgcgcagtcacagtacttctaccaggagcagccc
ccgcagtactgccacgtctaccagcagagcgtccatctgcagcaggcacagcagcaggca
cagcagacgcccgtccaggaggagctgcactcgcccaccaagcacttccaggccgagtcc
agctgtgccaccgtggtctctgaggtgagggacagcagcgttaaccagaagggcacacat
ccttcaatgagcgcgcccagccagaccgggcagagggccctgggcgagatgctgcccaca
gtccagctggtgagcatcaagtctgaaattcaagaggagcagcagccgcagcagcagcag
cagccaccagctggcactttgtggtcacaggtgatgttaaatgacatgaagcccgaagcg
acatccccagatgacagcaccctggccagcccaaccttcctggacagaactgaagtgaag
agcaagctggtatgtgccatctgcttcaaagagtttaagagcctgccagccctcaatggg
cacatgaggtctcacggcgggatgagggcatcgcccagcctcaaaccggaagacggggac
aagcagctgcccaaagaggtggatgcccatctgcccatcgtcatgcctgtctctgttccc
gtaaagcttctccctgcagctgctatgctccgccagcccactgatgccaatcagcttgct
gccgatcatgttgacaggtctgcccagctgccggcccctccaggaccaccatgccagcgg
ccgctagggcccccacacggctgctccgacgcacctcgcaagctcacaaaggccgagaag
ccagacaagcggggtcaacacgagaagaagaagtacaagcaccggcccgagcccctcatc
atccccccgccctccctcaccctctccgtgggcaatgccaccctgttccagagtcagcta
cgttctccgcggctccttggcgagcctcctccctacacgccgccccccatgctgagcccg
gtgagacaggggtccggcctcttcagcagcgtcatccagcacagccagtcgaccaaggcc
gccagccccatcacgcccagggtgtacctgggaaggagcagtggcgcagatgggctcagc
gtttcagtgacgccaggactgggagagcagctcgccaacattgagccgcacatcaacttg
gggcgccagtaccaagccgagatcccgaggctgcagagccgctcaaagatggccagcgat
gaccaccgagccagcctggtgtggacaaaccggccagagtttgaatcggccagcgggcag
cagaaggtggacaacttggtgaacatggcctgctccagtgtgctgccaggcggggggacc
aactccgagtacgccctgcactgcctgtttgagacccaaggggacttcctggccaccgtg
gagaagctgctgatgctgaagacgacgagacaagcgtctcatcccctggcaggttaccac
tatgctgggtctgaccagtggaccccactggagaagaagatgttgaagaaggcgctggtt
attcacaacaaggacttcttcttggtccagaagatggtgaagacgaagacggtgtctcag
tgcgtggagttctactacaccttcaagaagaggatgcacttgggcaggaagcaccgcagc
cggctgatgagcgccgaggaggaggagcagctgaccaatcagaatgaaaacaccgagctg
gacgaagtcgaggaggaaaagaagtccgcccaggaggagcagcaggacaccgcaatggtg
gacgtgtctccagatgatcgtgtcactgctcccgaagagccagctcctgtggagagtgcc
gctttggccaacatgtccagcttcagttttccttgcgagatgcccaactgtggagcggtc
ttcacatccagacaggccctaaatggccacgggcgaatccacgggggcacgacccagcag
gtcaagctggtgctgggcagcaagatgaaggtgggctcgcagtcggactactcctcggtg
aaggggtctcctgctcacagcaccaccagcggtgacaccgaccccacgctgctcttcccc
tgcaaggagtgtggcaaggtctttttcaagatcaaaagccgcaacgctcacatgaaaacc
cacaagcagcaagacgaccaggagcacaagaaggtcctgcacatgcccgccatgaagctg
ccctccagcctgtctcaggtgagcagacatcacgtgatgttaccgctggaccacatgggc
ctggtcaagcggcagggcctggacgaggaggacgaggaccccctgctgtcctcccatctc
ctgctggacgacgaccacggcggttacctgcgtgatgacgatgagctgtag
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integrated database retrieval system
