Polypterus senegalus (gray bichir): 120526576
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Entry
120526576 CDS
T08668
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120526576 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120526576 (cstf3)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120526576 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
120526576
NCBI-ProteinID:
XP_039605676
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All DBs
Position
1:complement(61347535..61472266)
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AA seq
717 aa
AA seq
DB search
MSLEGANDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEVKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAFADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDLRTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFKEEYEGKETALLVDRYKFMDLYPCSTSE
LKALGYKDVSRAKLATLIPETVVAPSIAPVLKDEVDRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPLCFTGPFVQVDDLMETFRRCKLPDTVDAAVELIT
GRQPELVAEGNGPVENNTIVNKALKRPSADSDEEEEKGATAPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagaaggagcgaacgaccaggcagcagagtatattccagagaaggtgaagaaa
gctgagaagaaattggaagaaaatccatatgaccttgacgcttggagcattctgatacga
gaagcacagaaccaacccatagacaaagcaaggaagacctatgagcgacttgtcgcccag
ttcccaagttctggcagattctggaaactgtacattgaagcagaggtcaaagcaaaaaac
tatgataaagttgaaaagttatttcagagatgcctcatgaaagtactgcacatagacctg
tggaaatgctatctttcatatgtcagagaaaccaaaggcaaactcccaagttacaaagag
aaaatggctcaggcatatgattttgccttagataaaattggcatggagatcatgtcttat
cagatatgggtggattacatcaactttttgaagggagtggaagctgtaggatcatatgca
gagaatcaaagaattacagcagttcgcagagtttatcaaagaggatgtgtgaatcccatg
ataaatattgaacaattatggagagactacaacaagtatgaagagggcatcaatgttcac
ttggccaagaaaatgattgaagatcgtagcagagactacatgaatgcaagaagagtagct
aaggaatatgaaacagttatgaagggtctggatcgaaatgcaccatctgtgccacctcag
aattcccctcaagaagcacagcaagttgaaatgtggaagaaatacattcagtgggagaag
agtaaccctttacggacagaggaccaaacactcatcacaaaaagagttatgtttgcctat
gaacaatgccttttagtgttgggccaccatcctgatatttggtatgaggcagcacagtac
ctagaacaatcaagtaaattacttgccgaaaaaggggatatgaacaatgccaaactgttc
agtgatgaagctgctaatatttatgaaagagctataagcactttgctaaagaagaacatg
ctgctttactttgccttcgctgattatgaagagagtcgaatgaaatatgagaaggttcac
agtatttacaacagactgctagctatagaggacatcgaccccactctggtttacatccag
tatatgaagtttgctagacgggcagagggcattaagtccggcaggatgatcttcaagaaa
gccagggaagatctgcgcactcgccatcatgtgtatgtctctgctgcattaatggagtac
tactgtagtaaggacaagtctgtagcattcaaaatctttgaattaggtttgaagaaatat
ggagatattccagaatacatattggcttatattgactatctgtcacacctcaatgaagac
aacaatacaagagttttatttgagcgagttttaacctctggcagcctgtctcctgaaaaa
tctggtgaaatatgggctcggtttttggcatttgaaagcaacattggagacctggcaagt
atcttgaaagtagaaaggaggaggtttacagcctttaaagaagaatatgagggaaaggag
actgcccttcttgtggacagatacaagttcatggatctttacccttgttcaacaagtgaa
ctcaaagctctgggctataaggatgtgtctcgtgccaaattagccacactaattccagaa
acagtagtggcaccatctattgcacctgttctaaaagatgaagtagacagaaagccagaa
tatcccaaaccggacaccaaccagatgatcccattccagccgaggcatttagcacctcca
ggacttcatcctgttccaggtggagtctttccagtgcctcccgcggctgtggttctcatg
aagctgctgcctcctccactgtgcttcacgggtccgtttgtccaggttgatgatctcatg
gaaacttttaggagatgcaagttgccagacactgtcgatgcagcggtggagctcataaca
ggtaggcagcctgaactcgtggcagaaggcaacggccccgtagaaaacaacaccattgtt
aacaaagccttgaagaggcccagtgccgactctgacgaggaagaagagaagggggccacg
gcgcctcctgtccatgacatctacagagcgcgccaacaaaagcggattcgatga
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integrated database retrieval system
