Polypterus senegalus (gray bichir): 120526597
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Entry
120526597 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120526597
04121 Ubiquitin system [BR:
psex04121
]
120526597
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120526597
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120526597
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_7th_ZNF462
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120526597
NCBI-ProteinID:
XP_039605693
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All DBs
Position
3:complement(125369654..125371688)
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AA seq
594 aa
AA seq
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MANPSEKPELEDPLSSLRSPVWEHFGFPVKVTDGQRQVDKSKVVCRHCSTTEIGYAAGNT
SNMLTHLKRHHPSVNVSYTRKKTSLVQTVTPITLAFKQHLASNSDRAKAITHGIGVFIAT
GLRPYSVVENAGFKYMIKVLEPRYEIPSHPHFSQKVVPALYEKTRSDVVSELSRVPSLSL
TTDSWTSRATESYLTVHFISPQWEMRNHVLQTRHVYEQHTSTNLAEHLKEAVNEWKLERP
GTTIPVTTDNAKNIVSAVKEAGLGPQIGCFAHTINLASQKVTSINQISRLLGKVRKIVTC
FHKSTTAAHILESKQEMLNIPKHSLIQDVPTRWNSSYDMLQRYPEQQAAIYSALTEKPLK
NKDIYTLNDEEVATAEEVIEALKPLKTITTLMSTESRASVSMIIPLKTTVLHSMAPKQED
TLDPRFKALPHIEDDERQKIFSDIITEMMTTTEEETEDATEIGAGSSSSPEASSTRSPPA
KKSVMTELFGELFQRQGGSSKPTLLEQVQEEVSKYRASGCLSLEADPLLWWKGHEATYPH
IAKLAKRYLCIPATSVASERVFSTAGDIVTATRSVLSAENVDKLIFLAKNFKLE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatccaagcgagaagcctgagctggaagaccctctcagctcattacgttctcct
gtctgggaacactttggcttccctgttaaagttaccgatggacaacggcaagtggataaa
tccaaagttgtttgtcgacattgttccaccacggagatcgggtacgctgcaggaaacacg
tctaatatgttaacacacttaaaacggcaccatccatctgtgaatgtttcctatacaaga
aagaaaaccagcttggtgcaaacagtaacaccgataactttagcttttaaacaacatcta
gcgagcaactctgaccgggccaaagcaataacacatggtattggagtcttcatagctacg
ggattacgtccatattcagttgttgagaacgctggctttaagtatatgattaaagttctt
gagcctcgctacgaaataccatcacatcctcactttagtcagaaagttgtaccagcactt
tatgaaaaaactagaagtgatgtcgtcagcgagctatcgcgggtgccctctctttcactt
acgacagatagttggacttcacgcgcaacagagagctatttaacagtccacttcatttcg
ccacaatgggagatgaggaatcacgttctgcaaacgagacatgtttatgaacagcacact
agcacaaatcttgcagagcacctgaaggaggctgtgaatgaatggaagctggagagacct
gggaccacaattcctgtaaccacagacaatgctaaaaacattgtcagtgctgtaaaagaa
gcaggactgggccctcagattggttgttttgcacacaccattaatctagcctctcaaaaa
gtaacaagcatcaaccagatatctagattactgggaaaagtaagaaagattgtgacatgt
tttcacaaaagcaccacagcagcgcacatcctggaaagcaaacaagaaatgctgaatatt
ccaaagcattctctcattcaagatgtccccacacgatggaattcaagttatgacatgctt
cagagataccctgaacagcaggcagctatatattcagcactaactgagaaacctctcaag
aacaaagatatatacacactcaatgacgaagaagtggcaacggcagaggaagtgattgaa
gcacttaaacctctaaaaacaatcacaaccctgatgagcactgaatccagagcgtctgtg
tccatgataatccccttgaaaactactgttctccactctatggcaccaaaacaagaagac
accctggacccccgattcaaagccttgcctcacatagaagatgatgagagacagaagata
ttcagcgacatcataacagaaatgatgacaaccacagaagaagagactgaggatgccaca
gagataggagctggatcctcatcatctccagaggcatcatccaccagatcacctccagct
aagaagtctgtaatgactgaactttttggtgaacttttccagagacaggggggaagtagt
aaaccaacccttttggagcaggtccaagaagaggtcagtaagtacagagcttcagggtgc
ctttcccttgaagctgatcctcttctttggtggaaaggccatgaggctacatacccacac
atagcaaagctcgcaaagcgttacctctgtattccagctacctctgttgctagtgaacgg
gtcttctccactgctggagatattgtcactgcaaccagatctgtgctttctgcagaaaat
gtggataaattaatctttctagccaaaaactttaagcttgaatag
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