Polypterus senegalus (gray bichir): 120526606
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Entry
120526606 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120526606
04121 Ubiquitin system [BR:
psex04121
]
120526606
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120526606
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120526606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120526606
NCBI-ProteinID:
XP_039605702
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Position
3:138393480..138395563
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AA seq
626 aa
AA seq
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MANASEKPELEDPPSSLRSPVWEHFGFPVKVTDGQRQMDNSKVVCRYCSTTEIGYAAGNT
SNMLTHLKRHHPSVNVSSTRKKTSLVQTVTLITSAFKQHLVSNSDRAKAITHGIGVFIAT
GLCPYSVVENAGFKYMIKVLEPRYEIPSHPHFSQKVVPALYEKLEVMSSSELSRVPSLSL
TTDSWTSRATESYLTVTVHYISPQWEMRNHVLQTRPVYEQHTSTNLAEHLKEAMNEWKLE
RPGTTIPVTTDNAKNIVSAVKEAGLGPQIGCFAHTINLASQKVTSINQISRLLGKVRTIV
TFFHKSTTAAHILESKQEMLNIPKHSLIQDVPTRWNSSYDMLQRYLEQQAAIYSALTEKP
LKNKDIYTLNDEEVAMAEEVIEALKPLKTITTLMSTESRASVSMIIPLKTTVLHSMAPKQ
EDSSAVREDKLAVTRSLQERYSVCYDFLHKCTALDPRFKALPHIEDDERQKIFSDIITEM
MTTTEEETEDATEIGAGSSSSPEASSTRSPPAKKSVMTELFGELFQRQGGSSKPTLLEQV
QEEVSKYRASGCLSLEADPLLWWKGNEATYPHIAKLAKRYLCIPATSVASERVFSTAGDI
VTATRSVLSAENVDKLMFLAKNFKLE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcaagcgagaagcctgagctggaagaccctcccagctcattacgttctcct
gtctgggaacactttggcttccccgttaaagttaccgatggacaacggcaaatggataac
tccaaagttgtttgtcgatattgttccaccacggagatcgggtacgctgcaggaaacacg
tctaatatgttaacacacttaaaacggcaccatccatctgtgaatgtttcctctacaaga
aagaaaaccagcttggtgcaaacagtaacactgataacttcagcttttaaacaacatcta
gtgagcaactctgaccgggccaaagcaataacacatggtattggagtcttcatagctacg
ggattatgtccatattcagttgttgagaacgctggctttaagtatatgattaaagttctt
gagcctcgctacgaaataccatcacatcctcactttagtcagaaagttgtaccagcactt
tatgaaaaactagaagtgatgtcgtccagcgagctatcgcgggtgccctctctttcactt
acgacagatagttggacttcacgcgcaacagagagctatttaacagtaactgtccactac
atttcgccacaatgggagatgaggaatcacgttctgcaaacgagacctgtttatgaacag
cacactagcacaaatcttgcagagcacctgaaggaggctatgaatgaatggaagctggag
agacctgggaccacaattcctgtaaccacagacaatgctaaaaacattgtcagtgctgta
aaagaagcaggactgggccctcagattggttgttttgcacacaccattaatctagcctct
caaaaagtaacaagcatcaaccagatatctagattattgggaaaagtaagaacgattgtg
acattttttcacaaaagcaccacagcagcgcacatcctggaaagcaaacaagaaatgttg
aatattccaaagcattctctcattcaagatgtccccacacgatggaattcaagttatgac
atgcttcagagataccttgaacagcaggcagctatatattcagcactaactgagaaacct
ctcaagaacaaagatatatacacactcaatgacgaagaagtggcaatggcagaggaagtg
attgaagcacttaaacctctaaaaacaatcacaaccctgatgagcactgaatccagagcg
tctgtgtccatgataatccccttgaaaactactgttctccactctatggcaccaaaacaa
gaagacagttctgctgtgagagaggacaagctagcagtcacaagaagcctgcaagaaaga
tactctgtgtgctatgactttttgcacaaatgcacagccctggacccccgattcaaagcc
ttgcctcacatagaagatgatgagagacagaagatattcagcgacatcataacagaaatg
atgacaaccacagaagaagagactgaggatgccacagagataggagctggatcctcatca
tctccagaggcatcatccaccagatcacctccagctaagaagtctgtaatgactgaactt
tttggtgaacttttccagagacaggggggaagtagtaaaccaacccttttggagcaggtc
caagaagaggtcagtaaatacagagcttcagggtgcctttcccttgaagccgatcctctt
ctttggtggaaaggcaatgaggctacatacccacacatagcaaaactcgcaaagcgttac
ctctgtattccagctacctctgttgctagtgaacgggtcttctccactgctggagatatt
gtcactgcaaccagatctgtgctttctgcagaaaatgtggataaattaatgtttctagcc
aaaaactttaagcttgaatag
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