Polypterus senegalus (gray bichir): 120526637
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Entry
120526637 CDS
T08668
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120526637 (ppfibp2b)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120526637 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
120526637
NCBI-ProteinID:
XP_039605733
LinkDB
All DBs
Position
1:65046554..65337733
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AA seq
1012 aa
AA seq
DB search
MSSDASHMLEAALEQMDDIIAGSKAVTEYTNSMFDIGSPGYLGSLQVLQLVEELKMALQF
LSNGEEKESLRDQIPEATILYLTKWLERGTVHLRSPVNNETYQERLSRLEGDKESLVLQV
SVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRTSLETQKLDLIDEVSNLK
LKLVGMEKEQRDCEHKQHKAESVVNLISELQEQMCRFQQEINIRILEKNAQEHRPAECKD
KELQQDTNPTLSVSSYGLHCYCGGEKGLLQELKMLKNKVEELEGEKSQYERKLKATKAEI
MNLQQQLETKDAEIESLRNQMALRAPIQSDSTEREEVYRRRLKEKHQELQRLKIGMETLL
TANEEKDRRIEELTLLLNQYRKIKDGPTSGICERIPSDSSEELNGTGKIRNPVYKVQPQI
IRTETPPRGPSPSLVSPSSVEKEVDSRTQQKMLSSSLEDLQSGSLPKHVVGEPVEPVVSP
ENKTFFENNKYQTLPGKFSRVNQNGDSEKLKSPNFQRIKDGAEENDFSLNIEHGWIDRSR
SASAPALGKTEKLDDSTPSPSDLSPRSSGVDSGPQSPGSPENKKSPKGIKKFWGKIKRTQ
SGNLNADDLGPSEFRRGGLRATAGPRLARTTDSESNISDYTAPFSQWKNEQVCSWLEEFG
LGHYVNLTRQWVKTGHTLLTATPQDMEREMGIKHPLHRKKLQLAVRSFNMKLNEKSAALD
HIWVTRWLDDIGLPQYKDQFNEARVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLH
VNQFNPNCLRRRPGDEHNTTPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIIL
EPRFNSDTMAMLLNIPPQKTLLRRHLTTNFNTLIGLEAQQEKREFMESSTYTSLTTTAKV
RPKKLGFSNFGHLRKKKLDDSVDYICPMDRGHPAINGTQDSYGGVRGLSPIFDKDLDELV
QIEVTEGTMKQIGVLSDGISNLTVAEVDLDADSVPLEEDKELVPWCMKETSL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagacgctagccatatgctggaggctgccttggaacaaatggatgatattatt
gcaggttccaaggctgtaacagaatataccaacagcatgttcgatattggttcaccaggg
tacttaggctccttgcaagtcttgcagcttgtggaagaactgaaaatggctttgcaattt
ctgtccaatggagaggaaaaggagtctttaagagatcaaattccagaggctaccattctg
tatttaactaaatggttagaaagaggcacggtacatcttcgctcacctgtaaacaatgaa
acctaccaagagcgactgtcacgtttagaaggggataaggagtcactggtactgcaggtt
agtgtattaaccgaccaggtagaggctcaaggagagaagataagagacttggagagctct
ctggaggaacaccaccacaagcttaactcaacagaagaaatgctccaacaggaactgctg
agcaggacatctcttgaaacacagaaactggatctcattgatgaagtttcaaacctcaag
ctgaagttagttggcatggaaaaggaacagcgtgattgtgaacacaaacagcacaaggct
gagtctgtggtaaacctgattagtgaactacaggagcagatgtgtagatttcagcaggag
atcaatatccgaatcctggaaaaaaatgcgcaggaacacagacctgctgaatgtaaagat
aaggagctacagcaagacacaaatcccaccctgagtgtttctagttatggactgcattgt
tactgtggtggggagaaaggtttactgcaagaactgaagatgctgaaaaataaagttgaa
gagctagagggggaaaagtcacaatatgaacggaaactcaaagccactaaggctgaaata
atgaatcttcagcagcagttagaaacaaaagatgctgaaattgaaagtctgcgaaatcag
atggcactcagagcccctatacaaagtgacagtacagagagagaggaggtttataggaga
aggctgaaagaaaaacatcaagaattgcaacgactgaaaattggaatggagactttgctg
accgctaatgaggaaaaggaccgtcgaattgaagaactcacattactgctaaatcaatat
agaaagataaaagatggtccaacatcaggcatttgtgagcggataccatcagacagcagt
gaagagctcaatggaactggaaaaataaggaatccagtttataaagttcagccacaaata
atcagaacagagacaccacctagggggccatcaccatctttagtttctccttcttcagta
gaaaaggaggtggacagcaggacacaacagaagatgttatccagtagtctagaagatcta
caaagtggatcactgccgaagcatgtagttggcgaaccagtagaaccagttgtatcacca
gagaacaaaactttttttgaaaataataaatatcagacacttccagggaaattctctcga
gttaatcagaacggagacagtgaaaaactgaagtccccaaatttccaaagaataaaagat
ggtgcagaagaaaatgattttagcctaaatatagaacatggatggatagatcgcagcagg
agtgccagtgctccagcattaggcaaaacagaaaaactggatgactcaacaccaagtccc
tctgacctttcaccccgctcctctggggttgactctggaccgcagtcaccaggctctcca
gagaacaagaagagtcctaaggggatcaaaaaattttggggcaaaattaaaagaactcag
tcaggtaaccttaatgctgatgatttgggcccttctgaattccgaagaggtggattgcgt
gcaacagcaggaccacgacttgcaaggactacagactctgaaagcaatatcagtgactat
acagctcctttttcccagtggaagaatgaacaggtctgtagctggttggaagaatttggt
ctgggtcattatgtgaatctgacgagacagtgggtaaagactggacacacactgctgaca
gccactcctcaagatatggaaagggaaatgggaattaagcatcccctgcacagaaagaaa
cttcagctggctgttagatcatttaatatgaaactgaacgaaaaatcagcagcactggat
catatatgggtgactcgatggctggatgatataggtctccctcagtacaaagatcagttc
aatgaagcaagagttgatggaaggatgcttcagtatttgactgtgaatgaccttcttttt
cttaaagttaccagtcagctccatcatctcagtattaaatgtgctattcatgtgctccat
gttaaccagttcaatccaaattgcctgcggcgcagaccaggagatgagcacaacacaact
ccttctgaagtggtacaatggtccaatcatagagtaatggaatggctgcgttctgtggat
ttggcagagtatgcaccaaatctccgaggtagtggcgtgcatggtgggctcattatttta
gagcctcgcttcaattctgatacaatggcaatgcttttaaacattccaccccagaagacg
cttttgagaagacacttgactaccaacttcaacaccttaattggtttagaagcacagcaa
gaaaaaagagagttcatggaatcttccacatacacatctctgacaactactgcaaaagtc
cggccaaagaaacttggattttcaaactttggacatttaagaaagaaaaagttggatgat
tctgttgattatatttgcccaatggacagaggccatcctgcaataaatggaacccaagac
tcctatggaggagtcagaggacttagtccaatctttgacaaggacttggatgaactggtt
cagatagaggttacagaagggacaatgaaacaaattggtgtactctctgatggcatcagt
aaccttacggttgcagaagtggacttggacgcagattctgttcccttggaagaagacaaa
gaactggtgccctggtgtatgaaggaaacctctctttaa
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