Polypterus senegalus (gray bichir): 120527105
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Entry
120527105 CDS
T08668
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120527105 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120527105 (usp38)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120527105 (usp38)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120527105 (usp38)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120527105 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120527105
NCBI-ProteinID:
XP_039606124
LinkDB
All DBs
Position
4:5092600..5176199
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AA seq
1053 aa
AA seq
DB search
MSTMDKILEALISSSHPLQVKKAIVKKVVEAAEKSVSHEQCQSLYQLTSRLVLLGEDSFQ
KQVGYQVMEAYARYHRDEFEQFLNKDFIVSLLQQGYGPLESKSPVIIDYIHSCLKLLFSC
PSVLEIFGVIQVEVLRVICERPNPQYCARLSSMLLDFVQCIPKGKSGLLFCQQLVRTISY
FHCSASQEKTLREYVSQVTKVSTLLQNIWKAEPSTLLPSLQEVFAIISSTDPSFEPSIAL
ASLVQHIPLQMITVLIRSLTTDQNVKDASMIRALCRMIDWLSWPLAHHVETWVIALLKGL
AAVQKFTILIDVTLLKIELVFNRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHIVD
LVQSLKSDGLPNSKAFLVQFTELIHCMMYQYSGFPDLYENILEAIKELPKPSEEKIKLVL
NQSAWTSQSNSLASGLLRLTGKSETGKTGLINLGNTCYMNSIIQTLFMATDFRRSVLSLN
LNGSNTLMKKLQLLFAFLAHTQRAAYAPHSFFEASRPPWFTTGSQQDCSEYLRFLLDRLH
EEEKTIQALVGAEIYGECKGGSWEAAGMSTIKEAPCKKKTLIEQMFGGRLSTAIRCQECN
SVSQKEEPFTDLSLAFRPSGEEHQQEACGVPPEAEKVHSLAEPSCSLSHTPSAPSQTGTG
ENTISYRAAPSSPQRNCDSVASESSNGGKLGSVPDLINYFLEPEILDEDNKYYCEKCASL
QRAEKTMWIVDEPEYLILTLLRFSYDAKCHVRRKILDNVAIPLFLQLPVHPVTSKSMASS
VSGSSCSSPLQVDSPESVENLAKKLKPSSKEEEEEVEELRVEEEAQKSEEMVLATQLVPY
VLSSVVMHSGMSSESGHYYTYGRNVTSTEPSMSSLGYQPEHTQSSPSPLSPTSTETRSGG
ERSTCTSIAKQDPEVAQLPKDWLLFNDSRVTFTSFHSVQNVTSRFPKDTAYVLFYRKQDV
SDSFNGRVLDDVKLNTEPPLQKELMDAITKDNKLYLQEQELSARTRALQAASAPCSFRPN
GFDDNDPPGSCGPTGGGGGGGSGGFNTVSRLVF
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatggataaaatcttggaagccctcatcagctcatcccaccctctgcaagtt
aaaaaggcgatagtaaagaaggtagtggaggcggcggagaagtcggtgagccatgagcag
tgccagtctctctaccagctcacttcgcgtcttgtgttacttggtgaggactctttccag
aagcaggtgggctaccaagtgatggaagcgtacgcccgctaccacagagatgagtttgag
cagttccttaataaggatttcattgtaagcttattgcagcaaggctatggcccactggaa
agcaagagcccagttatcattgactacatccacagctgcttgaagctgctcttcagttgc
ccttctgtgctggagatcttcggcgttattcaggtggaggtgctacgggtcatctgtgaa
cggcctaatcctcagtattgtgccagactcagctccatgctcctagactttgtgcagtgc
attccgaagggcaagtctgggctgcttttttgccagcagctggtcagaactattagttac
tttcactgctcagcatcacaagaaaagacccttcgggaatacgtatctcaggttactaaa
gtcagcaccttgctgcagaacatctggaaagctgagccttccactctgctgccctccttg
caagaggtgtttgcgatcatttcatctacagatccttcctttgagccttctattgcactg
gcaagtctcgttcagcacatcccattgcagatgattacagttctcatccggagccttact
actgaccagaatgtaaaagatgccagtatgattcgagctttgtgcaggatgattgactgg
ctgtcatggcctcttgctcatcacgtggagacgtgggtgattgcgctgctaaagggactg
gcagcggtacagaagttcactattctcatcgatgtcactctgctgaaaattgaactggtt
tttaatcgtctttggtaccccatcgtaagacaaggtgctttagctgttctatcacacatg
cttctgagcttccagcattctcctgaggctttccacttggtggtcccacatattgtggat
ttagtccagtcgctaaagagtgatgggcttccaaacagtaaagcgtttcttgttcaattt
actgagctcatacactgtatgatgtaccagtactctggttttcctgatctctatgagaat
atcctagaagcaataaaggagcttcctaaacccagcgaggagaagatcaaacttgttctg
aatcaaagtgcctggacttcacagtcaaattctttagcttcaggtcttttaaggctcaca
ggaaaatcggaaactggtaaaactggcctaataaaccttggaaacacgtgctacatgaac
agcattattcagacgctctttatggccactgatttcaggcgatcagttctttccctgaac
ctcaatggatctaacacgttaatgaagaaacttcagctgctgtttgcttttttggcacac
actcagagagcggcctatgcaccccacagtttttttgaagcttcaagaccaccatggttt
accactggctcgcaacaggactgctcagagtacctccgatttctgctagacagattgcat
gaagaagaaaaaacaattcaagcattagttggggctgaaatatacggtgaatgtaaaggt
ggaagttgggaagccgctggaatgagcaccataaaggaggctccttgcaaaaagaagact
ctaatagagcaaatgtttggggggcgactgtctacggccattaggtgccaggaatgcaac
agtgtctcccagaaagaggagcctttcactgacctctccttagcttttcggccttcgggt
gaagaacaccagcaagaggcctgtggtgtccctccagaggccgagaaggtgcactcctta
gccgaaccctcctgttcgctttcacacacaccttctgcccctagccagactggcactgga
gagaacaccatctcatatcgggcggcaccttcttctccgcagaggaactgcgattctgta
gcaagtgaaagctcgaacggtgggaaactgggctcagtccctgacctaatcaattacttc
ctggagcccgagatcctcgacgaggacaataaatactactgtgaaaagtgtgcatcgcta
caaagagcggagaaaacgatgtggattgtggacgaaccggaatacctcattcttaccctt
ttacgcttctcgtatgatgccaagtgtcacgtgcgacgcaagatcttagacaacgtggcg
attcccctgtttttgcagcttcctgttcatcccgttacatccaagagcatggccagctca
gtgtctggcagcagctgctcttcacccctgcaggtcgactcccccgaaagtgtggaaaat
ctggcaaaaaagctgaaaccttccagcaaagaggaagaggaagaggtggaggaattgagg
gtggaagaggaagcacagaagagtgaagaaatggtactcgccacccagctggtgccatac
gtgcttagttctgtggtcatgcattccggaatgtcttctgaaagcgggcactactatacg
tacgggaggaatgtaacgagcacagagccttccatgtctagtttgggttatcagccagag
catacccagagttccccttcacctctgtcacctacaagcactgagactcgctcgggtggg
gaaagatccacctgcacatctatagcaaagcaggacccagaagttgcccagctacccaaa
gactggctacttttcaatgacagccgagtcacatttacctcctttcattctgttcagaat
gtcaccagcagattccccaaagacacggcttatgtactgttctaccggaagcaggacgtg
agtgacagctttaacggccgggtcctagatgacgtcaagctgaacacggagcctcctctg
cagaaagaactgatggacgcgattacaaaagacaacaagctttacttacaggaacaagaa
ctaagtgcccgcactcgagccctccaggcagcgtcggccccctgttccttcagacccaat
ggttttgatgacaacgacccccctgggagctgcggaccgacgggtggagggggcggaggt
ggcagcggagggttcaacacagttagcaggctggtcttttga
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integrated database retrieval system
