Polypterus senegalus (gray bichir): 120527107
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Entry
120527107 CDS
T08668
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120527107 (abce1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
120527107 (abce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_16
RsgA_GTPase
AAA_15
AAA_29
VapE-like_dom
Fer4_2
NACHT
nSTAND3
Fer4_10
AAA_23
SRP54
TsaE
AAA_30
Fer4_4
ORC-CDC6-like
Fer4_21
AAA_24
Fer4_16
Fer4_7
AAA_19
Fer4_3
AAA_5
AAA_7
Fer4_9
Motif
Other DBs
NCBI-GeneID:
120527107
NCBI-ProteinID:
XP_039606132
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All DBs
Position
4:complement(5402578..5482720)
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AA seq
599 aa
AA seq
DB search
MSEKPTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDAPPDWQEILTYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGTVGSILSRKDDTKTEDIVCDQLDLTHLRGRNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETANEEEVKKMCRYQYPRMKKQLGDF
VLEIVEGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKF
KGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIESIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
QCTIANTPQTLLAGMNKFLAQLEITFRRDPNNFRPRINKMNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaccaacaaggattgccattgtgaaccatgacaaatgcaaacccaagaag
tgtaggcaagaatgcaagaagagctgccccgtggtccgaatgggtaaactttgtatagag
gttacaccccagagtaaaatcgtttggatttcagaatcactttgcataggttgcggtatc
tgcattaagaaatgtcctttcggagctttgtctatcgtcaacttgccaagcaacctggag
aaggaaacaactcacagatactgcgctaactcctttaagctgcacagattacctatacct
cgaccaggagaagttttaggattggttggcacaaatggtattggtaaatcaacagccctt
aaaattttagcagggaagcagaagccaaaccttggaaaatatgatgcacctccagattgg
caggaaatccttacttattttagaggttctgaactgcaaaactactttaccaagattttg
gaagatgaccttaaagccattgttaaacctcagtacgtggaccaaatccccaaaacagtc
aagggtactgtgggttccatcttgagcagaaaagatgacaccaagactgaggatattgtt
tgtgatcaacttgatttgactcatcttagaggtagaaatgtggaagacctttctggtgga
gaactgcagcgttttgcttgtgcggtggtatgcattcaaaaagcagacatttttatgttt
gatgagccgtccagttacttggatgtcaagcagcgtttgaaagctgccattacgattcgg
tctttgattacccctgacaggtatatcatagttgtagaacatgacttgagtgtgctggat
tacctgtctgacttcatttgctgtctgtatggagtgccaagtgcttatggagtagttacc
atgcctttcagcgttcgggaaggtattaacattttccttgatggctacgttccaacagaa
aatttgaggtttagggaaacatcattagtttttaaggtagcagaaactgcaaatgaagag
gaagttaaaaagatgtgtaggtaccaatacccacggatgaaaaagcagctgggagacttc
gtcttggagattgtggaaggagaattcacagactctgaaataatggtcatgttgggggag
aatggaactggcaagacgacattcatcaggatgctcgcaggaagacttaagcctgatgaa
ggaggagaggttccagtcctcaatgtcagctataaaccacagaagatcagcccaaagttt
aaaggaagtgtgcgacagcttcttcacgagaagatcagagatgcatacactcacccacag
tttgtaacagacgtaatgaaaccactacagattgaaagcatcattgatcaagatgttcag
aatctttctggaggtgaattgcagcgtgtggctctggctctctgtctgggtaaaccagct
gatgtctatttaattgatgagccttctgcatatttggattctgagcagcgtctcatggct
gccagagtcatcaaacgttttatccttcatgctaagaagactgcctttgttgtggagcac
gattttatcatggccacttacttagcagacagagttattgtatttgatgggattccctct
cagtgtacaatagccaacacaccccagacgctacttgctggaatgaacaagttcttagca
cagctcgagatcactttcagaagagatccaaacaacttcaggccaaggattaacaagatg
aactctatcaaggatgtggaacaaaagaagagcggcaactattttttcctggatgattaa
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