Polypterus senegalus (gray bichir): 120527116
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Entry
120527116 CDS
T08668
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04081
Hormone signaling
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120527116 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
120527116 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
120527116
NCBI-ProteinID:
XP_039606140
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Position
4:7041405..7174267
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AA seq
470 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSSCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEYPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLAQFRNLGQNEPHMPHNATFPDSFPDSF
PQVNSHPFPHSPNNSYPSSPGGGSSSTFPHSPTSSDPGSPFQIPAETPPPAYMPPEDQMT
QDGTQPMDTNLMAPLPLDISNRPDVQPVAYEEPKYWCSIVYYELNNRVGEAFQASSTSVL
VDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFV
QSRNCNYHHSFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMS
FVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaccagcttgttctccttcaccagtccagcggtaaaacgtcttttgggttgg
aaacaaggagatgaggaggagaaatgggctgaaaaagcagttgatgccctagtaaagaaa
ctaaagaagaaaaaaggagcaatggaagagctagaaaaagctctcagctgtccaggccaa
cccagcagttgtgtcactattccccgttcattagatggcaggttacaggtgtctcatcga
aaaggtctgccccacgtcatctactgccgtgtttggcgttggccagacttgcagagccac
catgaactgaaacctcttgagtgctgtgaatatccatttggatcaaagcagaaggaggtc
tgcatcaacccctaccactacaagcgagttgaaagtcctgtgcttcctcctgtcctggtt
cctcgacacagtgagtttaatccccagcacagtctcctggcacagttccgaaacctggga
cagaatgagccacacatgccacacaatgcaaccttcccagattctttcccagattctttc
cctcaggtcaacagccatccgtttccccattcgcctaacaacagctaccccagctctcca
ggtggtggaagcagcagcaccttcccacattctccaaccagctctgacccaggaagccca
ttccaaattccagctgaaactcctcctcctgcttatatgcctcctgaggatcagatgact
caggatgggactcagccaatggataccaacttaatggctcccctgccactagacattagc
aacagaccagatgttcagccagtggcatacgaagagccaaagtactggtgttccattgtc
tactatgagctcaataatcgcgtgggagaagccttccaggcatcctccacaagtgtgttg
gtggatggcttcactgatccttcaaataacagaaacagattttgtcttgggctgctgtcc
aatgtgaaccgaaactctaccattgagaataccaggcggcacattggcaaaggagtccat
ctttattatgttgggggagaagtatatgccgagtgccttagtgacagcagcatttttgtg
cagagtcgaaactgcaattaccaccatagcttccaccccacaacagtatgcaaaatccca
agtggctgcagcttgaagattttcaacaatcaggagtttgcagagcttttggctcagtca
gtgaatcatggttttgaagcagtctatgaactcaccaaaatgtgcaccattcgcatgagc
tttgtgaagggttggggtgcagagtatcatcgccaagatgtcactagtactccgtgctgg
attgagattcatttgcatggccctttgcaatggctggacaaagttcttactcaaatgggt
tcacctcataatcccatttcttctgtgtcctag
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