Polypterus senegalus (gray bichir): 120527120
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Entry
120527120 CDS
T08668
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120527120 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
120527120 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120527120 (lsm6)
03041 Spliceosome [BR:
psex03041
]
120527120 (lsm6)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120527120 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
120527120 (lsm6)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120527120 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
120527120
NCBI-ProteinID:
XP_039606146
UniProt:
A0ABS2Z7B0
LinkDB
All DBs
Position
4:7610585..7621625
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgaaagcaaacgcctagtgacttcctgaagcagatcattggaagaccagtg
gttgtaaaattgaattcgggggttgattatcgaggtgtacttgcttgcttagatggatat
atgaacatagccgttgaacaaacagaagaatatgtcaacgggcagctgaagaataaatat
ggagatgcttttctgcggggaaacaatgttctgtacataagtactcagaagaggaagatg
taa
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