Polypterus senegalus (gray bichir): 120527140
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Entry
120527140 CDS
T08668
Symbol
gatb
Name
(RefSeq) glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial isoform X1
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
psex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120527140 (gatb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psex03029
]
120527140 (gatb)
Enzymes [BR:
psex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
120527140 (gatb)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
120527140 (gatb)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120527140 (gatb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-GeneID:
120527140
NCBI-ProteinID:
XP_039606187
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Position
4:complement(12005412..12217549)
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AA seq
552 aa
AA seq
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MAAPLVRACGFCAVKLQRGGWCSKYVLISTNTFAFTIVRPTTVSPQSKPSPRKNDPKQWV
GVVGLEIHAQIHSNTKLFSGARVQFSAPPNSLVSFFDASLPGTLPVINRRCVEAAVMTSL
ALNCSINKKSLFDRKHYFYADLPAGYQITQHRLPIAVNGSLSYSHLVGQKWNQAVVKTVR
IKQIQLEQDSGKSLHDDTRKQTLIDLNRAGVALMEIVMEPDMSCGEEAAAAVRELQLILQ
ALGTCQGNMAEGQLRVDANISVHQPGDPLGVRTEVKNINSARFLAKAIDFEIQRQIDVLV
NGGVVHNETRTFDFKLGQTIPMRDKESLQDYRFIPEPNLPPLIVYDNESTPVNADPQQVI
NIDLIRKNLPELPSAKRTRLVDQYGILPEHSFVLVSEDGLTEYFVSVLQETKAEPKKVIG
WVIKELLALLKHYSLTVSQSHISPSSLAELLNLLEMGVISSPAAKQVFLLMWKECDKSPQ
QIVKEQDLGLVQNEKILEEICQNVLDGHLEEVAAIKKGNKRVLNKLIGLVQKEMKGRADP
IMVKTLLERKIS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctttggtacgagcatgtggattctgtgctgtcaaactgcaacggggaggc
tggtgttcaaaatatgttcttatttccacaaatacgttcgctttcacaatagtacgtcca
actaccgtgtctccgcaaagtaaaccgtcaccccgaaaaaatgatcctaagcagtgggtt
ggagttgtcggacttgaaattcatgcccagatccattctaacaccaaacttttctcaggc
gcccgagtccagttctctgcccctccgaattctttggtttccttttttgatgcatccctc
ccaggtacattgcctgttatcaacaggcgatgtgtagaggcagctgtgatgacttctttg
gctctcaactgttcaatcaacaaaaagtcattgtttgatcggaagcattacttctatgca
gatctgcctgctggataccaaattactcagcacagacttcctattgcagtgaatggcagt
ctcagttacagccacttagtaggacaaaagtggaaccaagctgtcgtgaaaacagtgagg
attaaacagatacaactggaacaggatagtgggaaaagcttgcatgacgacacaagaaag
cagaccttaattgacttaaacagagcaggagtggcactaatggagattgtaatggaacct
gacatgagctgcggtgaggaagccgcagctgctgtccgggagcttcagctgatcctacaa
gcactcggaacttgccaaggcaacatggcagagggtcagcttagagtggatgcgaatatt
tcagttcatcaaccaggagatcctcttggagtccggactgaagtgaaaaacatcaacagt
gctcggttcttggcaaaagcaattgactttgaaattcagagacaaatcgatgttcttgta
aatggtggagttgtgcacaatgagacacgcacttttgattttaaactaggacagactata
cccatgagagataaagaaagccttcaagactacaggttcattccagagcccaatttgccc
ccactcatagtttacgacaatgaaagtacaccagtgaatgccgatccccagcaagtgata
aacattgatttgatcagaaaaaatctgcctgagctgcccagcgccaagagaacccggctt
gtggatcaatatggaattctcccggagcacagttttgttttggtaagtgaagatggattg
acagagtattttgtcagtgttttgcaagaaactaaagcagaaccaaagaaagtcattgga
tgggttattaaggagctcttggcacttctcaagcattacagtctgactgtctctcagagt
catatctccccatcatctttggcagaacttcttaaccttttggaaatgggagtaatatca
tccccggcagcaaagcaggtttttctgttaatgtggaaggaatgtgacaagagcccccag
cagattgtgaaggaacaagacctgggcctagtgcagaacgagaagatccttgaagaaatt
tgtcagaatgtcctagatggtcatctggaggaggttgcagcaatcaaaaaaggaaataaa
agagtgctcaacaaactcatcggcctggttcagaaagaaatgaagggccgagctgatccc
atcatggtaaaaacactcctggagagaaaaatctcctga
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