Polypterus senegalus (gray bichir): 120527183
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Entry
120527183 CDS
T08668
Symbol
adamts12
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120527183 (adamts12)
Peptidases and inhibitors [BR:
psex01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
120527183 (adamts12)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
TSP1_CCN
Reprolysin_5
TSP1_spondin
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
120527183
NCBI-ProteinID:
XP_039606270
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All DBs
Position
4:22777730..23401625
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AA seq
1540 aa
AA seq
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MLRIQERWSSFLLKSICFLAISHANSLQLGNYHFPDQEQGDFLKNHEEYGVVYPTKVGSQ
GEFLSHILPHHVRTKRNIETNLNRVYYNVNYKGKDLFLNLTVNHNLISSNYVLERRSGSL
HDAKMQPRNHHSCYLIGTVTDAHLTNGPAALSTCTGLNGYLRLSDGNYFIEPLKSYNTEQ
DGPHPHVLYKQNFTLPTSRQKRDVDSKRGLKCGLKDTINKAEEQREAWERKHFKRKHLSR
RSVSKERWVETLVVADPKMIEYHGSENVESYIFTIMNMVAGIFHDPSIGNAIHIVVVRLI
LLEKEENGLKIVHHADNTLSSFCKWQRNINPKNDTHPAHHDVAILITRTDLCAGMNQPCE
TLGLSHLSGMCQPHKSCNINEDSGLPVAFTISHELGHSFGVYHDGQGNDCDPVAKQYFIM
SRQLQYDASPLKWSKCSKEYITRFLDRGWGACLDDRPSKKDLTIPIVAPGVLYDIHHQCQ
LQYGPNATFCDEVENVCQTLWCSVRGSCRSKLDSAVDGTRCGENKWCIFGECVAVGKRSD
TVNGNWGEWSSWSHCTRTCGSGIQSAERLCNNPSPQFGGKYCTGERRRYRICNPKDCEED
KPSFREMQCSEFNTVPYRNELHEWIPIFNSEYPCELHCQPKAGKFSEKMLDAVIDGTPCF
TANKNRNICVNGVCKAVGCDHAIDSNAVEDQCGVCLGDGSTCQTVKKLFDQKEGTGYVDV
AFIPKGARHITVREIGEAGNFLAMRGEDQEVYHLNGHFIIQWNGEYKMAGTSFLYERNGD
LENLTSPGPVNEPIYIQLLFQEQNPGVEYEYTIKKTNGNEIVEPEYIWKLGAWTDCSATC
GTGVQHQPARCIEKGNGVVEESYCNPQLRPEDKQKKCKNQDCPARWWVGEWQACSATCGQ
TGLKKRTVLCIRTVEEEEQTLPFSECRHLLKPKFQVPCNRDVLCGPKWIVGNWTECSVSC
GGGVRTRRIICAGTPKGACDMAKKPYSKSLCGLQSCPFHKKELHSQYPKIRRLFNPSKKI
TGGPVRNMPLPKRIKNVTVPPTYSQTFWTTVLPSTLVTPSSTSSIVEEDKNNEYYNEHLI
PVNNSKKSLSNDYEKSKETVKDNFLLGEEHGSTPDSQADTINKKNIRLTTGYDYLTDDST
PVSEEISEFPTEIYPTSTNSTLPSMSNSSASFKSKVNRPTERPVLKENDSWHIYTNTETP
KTTQLVHPDSKLPIFRKNINPYNITTEFPKLDIFKSNLKKTVNRGSNTCTTEMPGSYGPD
QENSFTATPDNEHFSNNPHSNNAVHWVTGNWSQCSTTCGLGAIWRRVECSTGKETDCKNI
KRPDPARRCHLQLCTIWKNGNWSKCSETCSGGTQIREVQCIDAQSKRHLRPFHCQALGMK
PPTVLSCNSEACLEWYQTPWSVCSKTCGVGFRERLVYCPQYNRCNGKQRPNSTEPCNEQP
CTRWVMDSWKECSVSCGGGVEHRDVMCIDEESNKAVDNSLCDKTKKPNEFQDCNLQKCEK
RANASCRKDSMSPKFCEKLKLLGRCSLTSIQKQCCMTCFG
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcatccaggagcgctggagttcctttctactgaagtctatctgctttttggca
atcagccatgctaattcccttcagctgggtaattaccattttccagaccaggagcaagga
gatttcctcaagaatcatgaagaatatggagtagtatatccaacaaaagttggttcacaa
ggagaatttttgtcacatattctgccccatcatgtaaggacaaagagaaacattgaaaca
aaccttaatcgtgtttattacaatgtaaactacaaagggaaagatctatttctcaatctt
acagtaaaccacaatttaatatctagtaactatgtcctcgagaggagatctggaagcctg
catgatgctaagatgcagcccagaaatcatcattcctgttacctcattggcactgtgaca
gatgcccacctaacaaatggacctgcagctctgagcacctgcactgggctgaatggatac
ttgagattgtctgatggaaactattttattgaaccactgaaaagttacaatacagaacaa
gatggcccgcacccacatgtcctttacaaacagaattttactcttccaacttccaggcag
aagcgtgacgttgactcaaaaagaggattgaaatgtggattaaaagataccatcaacaaa
gcagaagaacaaagggaagcctgggaaaggaaacattttaaaagaaaacatctttctcga
cgctcagtcagcaaggagcgatgggtagaaaccttggtggttgcagatccgaaaatgata
gaatatcatgggagtgaaaatgttgaatcctatatcttcacaatcatgaacatggttgct
gggatatttcacgatccaagcattgggaatgctattcacattgtggttgtgaggcttatt
ctgctagagaaggaggagaatggccttaagattgtccaccatgcagacaacaccctgtca
agtttttgcaaatggcaaaggaacatcaatcctaaaaacgacactcatccagcccaccac
gatgttgcaatactaataaccagaacagatctgtgtgcaggaatgaatcagccatgtgag
actttgggtctttctcatctttcagggatgtgtcagccccataagagttgtaacattaat
gaggattcaggactccctgttgcattcacgatatcacatgaacttggtcacagctttggc
gtatatcatgatggccagggaaatgactgtgacccagttgccaagcagtactttattatg
tcgagacaacttcagtatgacgcatcacctttgaaatggtcaaaatgtagcaaggagtac
attacacgttttcttgatcgtggatggggtgcctgtttagacgatcgtccatcaaaaaag
gacctaaccatcccaattgtcgccccaggagtcctctatgatattcatcaccagtgccag
ctacaatatggccccaatgccaccttttgtgatgaagttgagaatgtttgtcaaaccctt
tggtgctcagtgagaggatcgtgtcgttcaaagttggattcagcagtagatgggaccaga
tgcggggaaaacaagtggtgtatttttggagaatgcgttgcagtcggtaagcgatctgat
actgtgaatggcaattggggcgagtggagctcctggtcacactgtacacggacctgtgga
agtggaattcagagcgcggagaggttgtgcaacaatcctagccctcagtttggtggtaaa
tactgcacaggtgagcgcaggcgataccgaatttgcaatcccaaagactgtgaagaggac
aaaccaagtttcagggaaatgcagtgcagtgaatttaacactgtgccataccggaatgaa
cttcatgaatggattcctatttttaacagtgaatatccctgtgaactccattgtcagcca
aaggctggaaaattttctgaaaaaatgctggatgctgtaattgatgggactccatgtttc
acggccaacaaaaacagaaacatctgcgtgaatggagtttgtaaggctgtaggctgtgac
catgcaatcgattccaatgctgttgaggatcagtgtggggtctgccttggagatggatct
acttgtcagactgtgaaaaagttgtttgaccagaaggaaggcacagggtatgttgatgtt
gccttcatcccgaaaggtgcaagacatataactgttagggaaattggagaagcaggaaac
tttctggcaatgcgtggagaagaccaagaagtatatcacctgaatggacatttcattatt
cagtggaatggagaatacaagatggctggaacttctttcctttatgagcgaaatggagac
ctggagaatctgacatcacctggaccagtaaatgaaccaatatatatacagcttcttttt
caagagcaaaacccaggagtggaatatgaatacactattaaaaagaccaatggaaatgaa
attgtggaaccggaatacatttggaagctcggtgcttggacggactgctctgccacttgt
ggaacaggagttcaacaccagcctgcaagatgcatagagaagggaaatggagttgtagaa
gaaagttattgcaatccccagctacgaccagaagacaagcaaaagaagtgtaaaaatcaa
gactgtcctgcaagatggtgggttggtgaatggcaagcatgttcagccacttgtgggcag
acaggtctcaaaaaacgtactgttttgtgcattcgaactgtggaggaagaagaacagact
ctacccttttcagaatgcagacatcttctaaagccaaagttccaggttccctgcaataga
gatgtgctctgtggtccaaaatggattgtgggtaattggactgagtgttcagtctcatgt
ggtggaggagttaggacaaggaggattatctgtgcaggaactcccaaaggggcctgtgat
atggctaagaagccatattccaaatctctctgcgggcttcaaagctgtcctttccataaa
aaggagttgcattcacagtacccaaagatcagacgattgtttaatccatccaaaaaaata
actggcggtcctgtgcggaatatgcctttgcccaaaagaataaagaatgtgacagtccca
ccaacttactcacagacattttggacaactgttttgccaagtacactggtaactccgtca
agcacaagttccatcgtggaagaagacaagaataatgaatattacaatgaacacttaatc
ccagtaaataattccaaaaaatctttatcaaatgactacgaaaaaagtaaggagactgta
aaagataatttccttttaggtgaagaacatgggagcactccagatagtcaagctgatacc
attaataaaaaaaatatcaggcttactacaggatatgactatttgactgatgactccacg
ccagtgtctgaagaaatttcagaatttcccacagaaatttatcccacatcaaccaattca
acattgccttcaatgagcaacagttctgccagtttcaaatctaaagtgaatcgcccaacg
gagagacctgtccttaaggagaatgacagctggcacatttatacaaatacagaaacacct
aaaactacacagttagttcacccggacagcaaactacccatctttaggaaaaatattaac
ccctacaatataacaacagaatttccaaaacttgacatcttcaaaagcaatctcaagaag
actgtaaaccggggttcaaatacttgtaccacagaaatgccaggaagctatggtcctgat
caagaaaattcttttaccgccacaccagacaatgaacacttctccaacaatcctcattct
aacaatgctgtgcattgggtaactgggaactggagtcagtgctcaacaacctgtggacta
ggagccatttggagaagagttgagtgcagtactggcaaagaaaccgactgtaaaaatatc
aaacgccctgatcctgccagaagatgtcatcttcagctatgcacaatctggaagaatggg
aactggagcaagtgttctgaaacatgcagtggcggcacacaaatccgtgaagtacagtgc
attgatgctcagtcaaaacgacaccttcggccatttcactgccaggcacttggaatgaag
ccccctaccgtcctgtcctgcaatagtgaagcttgtttggaatggtaccagacaccttgg
agtgtgtgttcaaagacctgtggtgtcggctttcgcgaaaggcttgtctactgtcctcag
tataatcggtgcaatggcaaacaacggccaaacagcacagagccttgtaatgaacagcct
tgtacgcggtgggtcatggattcgtggaaagagtgctctgtctcttgtggtggcggtgta
gaacacagagatgtgatgtgcatagatgaagaaagtaacaaagcagtagataacagcctt
tgtgacaagacaaagaaacctaacgaattccaggactgcaatcttcagaaatgtgaaaaa
cgtgcaaatgcctcctgccggaaagacagcatgtcacccaaattttgtgagaaactcaaa
ctgctgggaagatgttctttgacaagcattcaaaaacaatgttgcatgacttgctttgga
taa
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