KEGG   Polypterus senegalus (gray bichir): 120527233
Entry
120527233         CDS       T08668                                 
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psex03019]
    120527233
   04121 Ubiquitin system [BR:psex04121]
    120527233
Enzymes [BR:psex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120527233
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120527233
Ubiquitin system [BR:psex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120527233
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 KH_DEAH11_2nd zf-C3HC4 Prok-RING_4 RING_XB3-XBAT31 zf-P11
Other DBs
NCBI-GeneID: 120527233
NCBI-ProteinID: XP_039606342
LinkDB
Position
4:complement(30216885..30245843)
AA seq 601 aa
MPSSTSLLVAEETEPELPPLVVERLADLGLDDHGPKNHQEPRDALLASAHRQHSSRFGVL
ESMLDRPPMIRHQQEELQQQHEDEEDCDEREGDALEDDDTQARIHGLGSMMFSELEASEP
VMLYNGVVDDHPQQVASMIMALNTGYTESVFEGDPPSLQRRKSVNTTECVGVPSSEHVAE
IVGRQGCKIKALRAKTNTYIKTPVRGDEPVFVVTGRKEDVAMAKREILSAAEHFSMIRAS
RNKNGPMTGGLPGAPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRD
KEPVFEVTGMPENVDRAREEIEAHIAVRTGNYVEMSGEENDFHYNGTDVSFEAGSAGSAW
LNFSRAPPGVSSRSARMISNYRNDSSSSLGSGSTDSFFGGNRMADFSPTSPFNTSNSFWF
GDSLVPLTSDDLGGMESPGFDSLSAPLPSHQQQAIWSTYDQNSTFSGFEGKSHSRDSQPS
TPRLSPTFPDALEHPLARRVRSDPLSMGSQGPDLQMYIPAFSSSSDSTTSSSPPDSASSA
GLCRSKRDCIKCFESEIIAALVPCGHNLFCMECANRICEKNEPLCPVCQTPVTQAIRIYN
M
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcccagtagcacatcattgctggttgccgaggagacagagcctgagctcccgccgctg
gtggtagaaaggcttgccgacttaggcctcgatgaccacggcccgaagaatcaccaggag
ccgcgggacgcgttactcgcttcggcgcaccggcaacattcatcccggtttggggtgctt
gaatcaatgctggatcgaccaccgatgatccgacatcaacaggaagagctgcagcagcag
cacgaagacgaagaagactgtgacgaaagagaaggagacgcactggaagacgacgacacg
caggccaggatccacggtttaggctcgatgatgttttcggaactggaggcctcggagccc
gtaatgttgtataatggagttgtggatgatcatccgcagcaagttgccagcatgattatg
gcattgaacaccggttacacagagtccgtctttgagggcgatccgccgtctttgcaacgg
aggaagagcgttaacaccaccgaatgtgtaggagttcccagctccgaacacgtcgcggag
atcgtgggcagacaaggttgtaaaattaaggctttgcgggccaagacaaacacttacatc
aagactcctgtgcgtggtgatgaaccagtctttgtggtcactggtcgaaaggaagatgtg
gcaatggcaaagcgggaaatactatctgcagcagagcacttctccatgatccgggcctct
cgcaataaaaatggccctatgacaggagggctccctggggcccccaacctcccaggccag
accaccatccaggtacgagtaccctacagggttgtagggttagttgttggcccaaaaggc
gccaccataaagcgaatacagcagcagacacacacatatattgtaacgccaagccgtgac
aaagagccagtgtttgaagtgacaggcatgcccgaaaatgtggacagagcacgggaagag
attgaggctcacattgctgtgaggacaggcaactatgtggagatgtctggagaagagaat
gactttcattataatggcacagatgttagctttgaagcgggatctgcaggaagtgcttgg
ctaaacttcagccgggccccacctggtgttagctcccgtagcgcccgaatgatttccaac
taccggaatgatagttccagctctttgggaagtggttctacagattctttttttggtggc
aaccgtatggctgacttcagccccacaagtccctttaacaccagtaatagtttctggttt
ggagattctcttgttcccttaacctccgatgatttgggagggatggaatcacctggtttc
gattccctgtctgctcctcttccatctcatcagcagcaagccatttggagcacctatgat
caaaacagcaccttttctggatttgagggaaagagccatagccgagacagccaaccctct
acgccccgcttgtctcccaccttccctgacgccctggagcatcctctggctcgccgagtg
cgaagcgatcccctcagcatgggtagtcagggaccagaccttcagatgtacatcccagcc
ttttcgtcctccagtgacagtaccacctcaagctcacctccagactccgcaagctctgca
ggtctctgccgaagtaaacgggactgtataaaatgttttgagagtgagattattgctgcc
ttggtgccctgtggccataatctcttttgcatggaatgtgcaaaccgaatctgcgaaaaa
aatgagccactgtgccctgtgtgtcagacccccgttacacaggctatacggatctacaac
atgtga

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