Polypterus senegalus (gray bichir): 120527234
Help
Entry
120527234 CDS
T08668
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120527234 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120527234 (dcc)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
DCC/UNC5 family
120527234 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
Fn3_VIN3
FN3_DSCAM-DSCAML_C
Ig_Rha78A_N
C2-set_2
Interfer-bind
CRLF2-like_D2
Ig_4
Sp38
Ig_PDGFR_d4
Protocadherin
TM_ErbB1
EphA2_TM
Arylsulfotran_N
FAM176
Motif
Other DBs
NCBI-GeneID:
120527234
NCBI-ProteinID:
XP_039606343
LinkDB
All DBs
Position
4:31131526..31973891
Genome browser
AA seq
1448 aa
AA seq
DB search
MENTLGYIGLKKLFFLVLWLTNLKSDAAASDPVKNFISLRFVREPADSIAVRGGNVLLDC
SVESSQGTPVISWKKDGIFLDSVVEDRRQQLSNGSLLIQNVVHSRHHRPDEGLYQCQATL
EGVGAIVSRMAKVTVAGPLKPVVQTDSVSSFVGDMALLKCEASGEPMPLVRWQKNRDDLP
LGVGGDGRIVVLPSGTLQVSKVQPSDSATYRCFAENPGSSRTGNDAELKVLAEPGLPRAI
TFLQRPFDVTTLEGKDAILECSASGYPNPNFQWMRGSELVQMRSKKYSLLGGSNLLITRV
TDDDSGTYTCVASTKAENSSATAELSVMVPPRFLNYPTNLYAYESMDIELECTVTGKPAP
TVQWVKNGEVVIPSDYFQIVGGSNLHILGLVKSDEGFYQCVAENDAGNVQASAQLIIQEP
VVPSTSALPSAPRDVVPVLVSSRFVRLSWRPPAETHGSIQTYSVFFSREGVNRERAMNTS
QPGALQISIDNLKPEATYSFRVVAYNDRGPGESSQVLKVSTQPELQVPGPVENMQALATS
PTSILVSWEVPAYANGPIQGYRLFCTEVSTGKEQNIEVDNLSYRLEGLKKFTEYSVRVLA
YNRYGPGMATEDLTVSTLSDVPSSPPLNISLEVVNSRSIKVSWMPPPSNTQNGFITGYKI
RHRKTGRRGDQETLEPNNLWYLFTGLEKGSQYSFQVAAMTANGTGPSSEWYTAETPENDL
DESQVPDQPSSLHVRPLTNSIVMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIENLEPSSHYVISLKSFNNAGEGVPLYESAVTRSMTDPIDSSDDDLYHLFDKFPTPVP
DTSTPMIPPVGVQAVALTPDSVRVSWADNSVSKNQKTAEVRFYTVKWRTSYSTSGKYKSA
DTTALSHTVTGLKPNTMYEFAVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVISREG
KPRAVIISWQPPLEGNGKITGYILFYTLDKNMPIDDWVMESISGDRLTHQIMDLNLDTVY
YFRIQAKNAKGVGPLSDSILFRTPKVEHPDKMANDQGRHGDGGYWPPDTNLIDRSSLNEP
PIGQIHPPHGSVTPQKNSNLLVIIVVSVGAVTIVVVVIVAVICTRRSSAQQRKKRATHSI
GKRKGSQKDLRPPDLWIHHEEMELKNIEKPTGSDPAGRDSPMQGCQDITPVSHSQSESQM
GSKSSHSGADADEVASSMSTLERSLAARRATRTKLMIPMDSQPSNPPVVSAIPVPTLESA
QYPGILPSPTCGYPHPQFTLRPVPFPTLTVERSYGSGRTMTEGAAVHSQQPSLLAQTQAE
HSVPEEVPSRTIPTACVRPTHPLRSFANPLLPPPMSAIEPKVPYTPLLSQTGANLPKAQV
KTASLGLAGKARSPLLPVSVPTAPEVAEEGNKQSEDPSSVYEQDDLSEQMASLEGLMKQL
NAITGSAF
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggagaatactcttggatatattggtctgaaaaagctattttttctagtactttggcta
accaatttgaaaagtgatgctgcagcaagtgatcctgtgaaaaatttcatttcactgcga
tttgtcagagagcctgctgattccatcgcagtcagaggaggaaatgtgctgctggactgc
tctgtggaatcgagccaaggcacaccagtcatttcctggaagaaagatggcatctttctc
gattcagtggtagaagacagaagacagcagctatctaacggttccctcttaattcagaat
gtggtgcactcccggcaccatcgaccagatgaagggctctaccaatgccaggctaccctc
gaaggtgtgggagctattgtaagcaggatggcaaaagtcacagtagctggtcctctgaag
ccagttgtccagacagattccgtttcatcttttgttggagacatggccctactgaagtgt
gaggcaagtggggagccgatgccactggtgcgctggcagaagaaccgggatgacttacct
ctaggtgttggtggtgatggccgtattgtggtgctgccatctgggacccttcaggtcagc
aaggtccagccatcagactcagccacctatcggtgttttgccgaaaatcctgggagctct
cggactggcaatgatgctgagttgaaagtattagcagaaccaggccttcctcgagccata
acatttcttcagagaccatttgatgttactactctagaaggaaaagatgccattctcgaa
tgctctgcttctggatacccaaatccaaactttcaatggatgcgagggagtgaactcgtt
caaatgagatcaaaaaaatattccctactgggaggtagcaatctgcttattacaagagtt
acggatgatgattctgggacctacacttgtgtggcatcaaccaaagctgaaaacagcagt
gctacagcagaactgtctgtgatggttcctccgaggtttttaaattatcccactaacctg
tatgcgtatgaaagcatggacatcgaattggagtgtaccgtgacaggaaagcccgctccc
actgttcagtgggtcaagaatggggaagtggttatcccaagtgattattttcaaattgtg
ggtggtagtaatcttcatattcttggacttgttaaatcagatgaaggattttatcagtgt
gtggcagaaaatgatgcaggaaatgttcaagccagtgcccaacttatcattcaggaacca
gttgtcccgagcaccagtgccctcccttctgccccccgagatgtggtccctgtcctggtt
tccagtcgctttgtccggctaagctggcgccctcctgcagagacccatggatcaatccag
acgtatagtgtcttcttcagcagagaaggagtcaacagggaaagggcaatgaacacatca
cagccaggagcactgcagattagcattgacaacttaaagcctgaagcgacatattctttc
cgtgtggtggcttacaatgaccggggaccaggagagagctcacaggttttgaaagtatcc
acccagccagaattgcaagttcccggaccagtagagaacatgcaggctttagccacatct
ccaacttcaattcttgtttcttgggaagttcctgcttatgccaatgggcccattcaaggt
tatcggttattttgcacagaggtgtcaacaggaaaagaacagaatatagaggtggacaac
ctatcttacagactggagggactgaagaagtttactgagtactcagtgcgagtcctggca
tataatcgatacggacctggcatggctacagaggacttgacagtttccacactttctgat
gtgccaagctcccctcctttgaacatttcgttggaagttgtcaactcaagaagtatcaag
gtcagctggatgccccctccttcaaacacgcagaatggcttcatcactggttataaaata
cggcacaggaagactggacgcagaggggatcaggaaacattggagcctaacaatctttgg
tacttgtttacagggttggaaaaaggaagccagtacagttttcaagtagctgccatgaca
gcaaatgggactggaccttcaagtgagtggtacacagctgaaactcccgaaaatgatctt
gacgaatcacaggtaccagatcaaccaagttcgctccatgttcgaccacttaccaacagt
atcgtcatgagttggactcctcctttgaatccaaatattgtagtcagaggatacatcatt
ggatatggagtgggaagtccttacgcggaaactgtcagagtagacagcaagcaacgatac
tactccattgagaaccttgaaccaagttcccattatgttatttccctgaagtcatttaac
aatgcaggtgaaggagttcctctgtatgagagtgcagttacgagatctatgacagaccct
attgactcatcggacgatgatctctaccatctgtttgataaattccctaccccagtccca
gatacctccactcccatgatcccaccagtaggtgtacaggccgttgctctcacacccgac
tctgtgagagtcagctgggcagacaactctgtttccaagaaccagaagactgcagaggtc
cgcttctacactgtcaaatggaggaccagctactcaaccagtgggaaatacaagtctgca
gacaccacggctctgagccatacagtgactggactcaaacccaacaccatgtatgagttt
gctgttatggtaaccaaaggccgcaagtcaagcacatggagcatgacggcacatgccacc
acctatgaagcagctcccagttctgcccctaaggacctcacagtaataagcagggagggc
aaacctcgagctgtgatcattagctggcaacctccacttgagggcaacggaaaaatcaca
ggatacattctcttctacacgcttgacaagaacatgccaattgatgactgggtaatggag
tccattagtggagaccgcctcactcaccagatcatggacctcaaccttgacactgtttac
tacttccgcatccaggccaagaatgcaaagggagtcggcccgctgtctgactccattctc
ttcagaacacccaaagtggaacaccctgacaaaatggctaatgaccaaggtcgccatggt
gacggaggatattggccgcctgacactaatctgattgacaggagtagccttaacgagcct
cctattggtcagatccacccacctcatggtagtgtgactccacagaagaacagcaacctt
cttgtaataatcgtggtgtcagttggtgctgtgaccattgttgttgtggttattgtggct
gtcatttgtactcggcgctcttctgcacaacagcgaaagaaacgtgccacacacagtata
ggcaaaagaaaaggcagtcaaaaagacctgaggcccccagacctatggattcaccatgag
gaaatggagctgaagaacattgagaagcccactggctctgacccagctggccgggactcg
ccaatgcagggttgtcaggacatcacacctgtcagccacagccaatcagaaagccagatg
ggaagcaaaagcagccactcaggagcagatgctgatgaagtggccagcagcatgtctacc
ttggagaggtccctcgctgcccgcagggcaacacgcaccaaattaatgattccaatggat
tcccaacctagcaatccacctgttgtaagtgccattccagtgccaactttagagagtgcc
cagtatcctggaattctaccatctcccacttgtgggtaccctcaccctcagtttacatta
cggcctgtgccattcccgacccttactgttgaacggagctacggatcaggtagaacaatg
actgagggcgcggcagtacattcccagcaaccatccctgcttgctcaaacgcaagctgag
cattcagtaccagaggaggtacccagcaggaccatccccacagcctgtgtccggcccacc
cacccactccgaagctttgccaaccccttgctacctcccccaatgagtgccatagagccc
aaagtaccctacacacctcttctgtctcagacaggtgcaaatcttccaaaggctcaggtg
aagactgcctccttggggttagctggaaaggcaagatcaccattacttcccgtctccgta
ccaacagctcctgaggtagcagaagaagggaataaacagtcggaagatccctcaagtgta
tatgagcaggatgatctgagtgagcagatggctagtctagagggactaatgaaacaactg
aacgccattactggctcggccttttaa
DBGET
integrated database retrieval system
