Polypterus senegalus (gray bichir): 120527294
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Entry
120527294 CDS
T08668
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120527294 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120527294 (nipblb)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120527294 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ALKBH8_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
120527294
NCBI-ProteinID:
XP_039606472
LinkDB
All DBs
Position
4:42760258..42898002
Genome browser
AA seq
2835 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRVAEEVSCLLACRDEN
LVSQLAHSLNQVSTDHIELKDNLGSDDPEGDIPALLQTVLSRNPNVFREKSMQNRYGVQG
GIMQQPMMPQYKMAQNSMHNSPASSNYQQTTISHSPSSRFVPPQTSSSNRFMHQQNSPVP
SPYAPTSPAGFMQYAHTPSYTQHQQIQQELHGSPLVSAPTFSGSPQRPVQPCLIVQTQPS
PQQNSSTPTLVCVASSMVPGSMRNIHDNKVCGQMSSNSANHHADNSRHGSNEDYLHLVHR
LGNEDNDPAIRNASFSLRSPQSVCSPAGSDGAPKAGSRPPLILQSPPPPYASPRDAASDI
LIDSPDRKKKQKKMKMSKEEKEQADKAAMYDIISSPSKDSTKLTLRLSRVKSSEMDPQGD
LLPGMDNSTDPEGDLAYNNMQYTGPPPKTPVAPQDVLRPFNAAAQCLPQNEQVNFLQAQQ
VPVLQQNNSVVSAKQPQPLAVQPQDAPQLQGAMQPLSVTPYDEVEMDALAEIERIERESA
IERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGSTGGTSGGGVGSTGNKVGPQEASV
AGNGSSRPALMVSIDLHQAGRTDSQSLPEQMSAMDKQTEEQQGLPTPIEASDGDVPETIK
QEDPASAVTPVLENQPEDSSKKSDSETHNVCDERPEVIKHRPETPKQKVENRTEATRQKG
ENRPETPKPKGDNKPDTVKQKSVESKPETPKQKETILDTPKQKCSENRSDTQHHKSENRR
ESSSKSSNSEKRSEVSKHRHEGKTDSSKVKTEGRSSETRQRTDGRPISSSSESSRRDHDG
HRQDKGLGDQSRMRRPETPKSSSRGEPESKHGVKSESSRDRERERKHRHESGETRERRTS
EDQKSRPESPRVKQESKGDSSNRHRPDRHGIRSPNSKDERRSDGNRNRPDSHKSQPDNKA
EFPSYLLGGRSGVLKNFVIPKIKRDKDGNITQEIKRSNLKQEHKGKVEKMGLVEDLNKGA
KPVVVLQKLTFDEVQKFIKEKQDRNARTSNKSSKNRPSSKSGKGGIDQSVLKDLPPELLA
EIESTMPLCERVKMNKRKRSTVNERPKYAEVSSEDDSESDEAFESPRKKHKKDKDKAWEY
EGHRDRRSSGDHRRSSFLQEGRRSSGSRYRERSPDDSEDDSPPPSLSDIARRMKKKEKLK
KRKAYEPKLTPEEMMDSSTFKRFSASVDNILENLEDMDFTALADDDEIPQELLLGKHQLN
ELGSESAKIKAMGITSRLPSDKMVKLLNILEKNIQDGAKLSTMINHDNDTEDEERLWRDL
IMERVTKSADACLTALNIMTSPQMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRID
PHGGGVLTSKAKRAKCSTHKQRVIVMLYNKVCDIVSNMSELLEIQLLTDTTILQVSSMGI
TPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSD
VDGEPMYIQMVTALVLQLIQCVVHFPAQKDANSEEEYDKKVDQDVLIINSYETAMRTAQN
FLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQ
TEMALRVASLDYLGTVAARLRKDAVSSKMDQSSIDRILKQSPGNDEIQQLQKALLDYLDE
NADTDASLVFAKKFYIAQWFRDTTTETEKAMRSQNQKDEDSSEGAHHAKEVQTTGEIMQK
AEARKKFLRSIIKATPSQFSTLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILR
VLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFV
LSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSKVTEMCVKMIRRVNDE
EGIKKLVNETFQKLWFTPTPNHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSE
EDSSYKPAKKACVQLVDNLVEHILKYEESLADSENKAVNSNRLVACITTLYLFSKIRAQL
MVKHAMTMQPYLTTKCNTQSDFLVICNVAKILELVVPLMEHPSETFLVTIEEDLMKLIFK
YGMTVVQHCVSCLGAIVNKVTHNYKFVWACFNRYYGAIIKFKIQHQEDPNSTVLTANKPT
LLRSLFTVGALCRHFDFDQEEFKGNQKVVIKDKVLELLLYFTKHADEEVQTKAIIGLGFS
FIQHPNLMFEQEVKNLYNGILSDKNSSLNLKIQILKNLQTYLQEEDTRMQEADREWKKLS
KQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSKVRHFALNVIALTLNQGLIHPVQC
VPYLIAMGTDPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGIKMSYQVQQAIWASHDTII
RGFRQDENSTALCSHLYTMVRGNRQHRRAFLIALLNLFDDSAKTEVNMLLYIADNLACFP
YQTQEEPLFIMHHIDITLSVSGSNLLQSFRESLLKEERVKEKTKKYFSEDDEDEQTSESE
EEDEEEVEVRRPKKSRRRVNSDSESESESDFDDVEQVMNRLPDSPIPLIEFANASQGILL
LLVLKQHLKNLYGFSDSKIQKYSPTESAKIYDKAVNRKSSVHFSPRQTIEFLSNDMANAE
LTDEVKRKIVRQYLDFKLLMEHLDPDEEDEEGEASASANARNKAINALLGGGSPKNNTAD
TEDDESDGEDKGGASGSKRPKRGESAEVTGQLNETVEAMDVIAICCPKYKDRPQIARVIQ
KTSNGYSVHWMAGSYSGAWAEAKKRDGRKLVPWVDTIKESDIIYKKIVLTSAHKLTNKVV
QTLRSLYAAKDGTSS
NT seq
8508 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgcaagcctcaca
gacttattaaatcagcttcctctcccatcaccgcttcctgccactaccactaagagcctg
ttgtacaatggaagggttgcagaagaagtcagctgtctcttggcctgtcgagatgaaaac
ttagtttcacagcttgcacacagtctcaaccaggtctccacggaccacatagagttgaag
gataatcttggcagtgatgacccagagggtgacatcccagcgctgctgcagactgtcctg
tctcggaaccctaatgttttcagggagaaaagtatgcagaaccgatacggggttcagggc
ggtattatgcagcagccaatgatgcctcagtataaaatggcacagaattccatgcataac
agccctgcttcttccaattatcagcaaaccactatctctcatagtccatcaagtcgcttt
gtaccgccacagacgagctctagtaatcgattcatgcatcagcagaacagccctgttccc
agtccgtatgccccaacaagtcctgcaggtttcatgcagtatgctcacactcccagctat
actcagcaccaacagatacagcaagagctccatggctcccctcttgtttctgcacctaca
ttttcaggaagccctcagaggccagtgcagccttgtctcatagtgcagactcagccctct
ccacagcagaattcttccaccccaacgttagtttgtgtagctagttccatggtccctggc
agcatgagaaatattcatgataacaaagtatgtggccagatgtctagtaattcagctaat
caccatgcagataactccagacatggatcaaatgaagactatcttcacctggtgcacaga
ctgggtaatgaggacaatgatcctgctatcagaaatgcttccttttcccttcggtcccca
cagtctgtctgttctcctgctggcagtgatggtgctccaaaagctggatctagaccaccc
cttatcttgcaatctccaccacctccatacgcctcacccagagatgctgcatcagacatc
cttatagactccccagacagaaagaaaaaacagaaaaagatgaaaatgagtaaagaagaa
aaagagcaggcagataaggcagcaatgtatgacatcatcagctctccatctaaggactcg
acgaaactcacgttaagactgtcgcgtgttaaatcatcagaaatggacccgcagggtgat
ttgctccctggcatggacaacagtacggatcctgagggtgacttggcatataacaacatg
cagtatacagggccacctcccaaaacgccagtggccccccaggatgtgctccggcccttc
aatgctgctgctcaatgcttgcctcaaaatgagcaggtcaatttccttcaggcacaacaa
gtgccggttttacagcagaacaattcagtggtgtcagccaaacaaccacagccgctggca
gtgcagccccaagacgcaccccagctacagggagccatgcagcccctgtctgtgaccccc
tatgatgaagttgaaatggacgctctagcagagattgagaggatagagcgcgaatctgcc
atcgagagagagcgctgctcaaaggaggtgcaggataaagataagcctttgaagaaaagg
aagcaagattcctatccacaggaaccaggagccggaggaacagctggtagtacaggggga
accagtggtggaggagttggcagcacagggaacaaggttggtccacaagaagccagtgta
gctggaaatggatctagtcggccagctctaatggtgagcattgacctgcatcaggcaggt
cggacagattcacagagtctcccagaacaaatgtctgcaatggataaacaaacagaggaa
caacaaggattacctactcctattgaggcatctgatggggatgtacctgagactataaaa
caggaagatccagccagcgctgtcacgccagttttagaaaatcagccagaggactccagt
aagaaatcagactctgagactcacaatgtttgtgatgaacgacctgaggttatcaaacac
cggcctgaaactcctaagcaaaaagtagaaaataggactgaggcaacaagacaaaaagga
gaaaacaggccagagactcctaaaccaaaaggagacaataagccagacactgtaaagcag
aaaagtgtagaaagtaagccagagactccaaaacaaaaagagactatattggacacacca
aaacagaaatgtagtgaaaacaggtcagatacacaacaccacaaatctgaaaaccggcga
gaatcttcttccaagtcatctaactctgagaaaaggtcagaagtgtcaaaacacaggcac
gaaggcaaaacagattctagcaaggtaaaaactgaaggaaggagttcagaaactaggcaa
aggacagatggacggcctatttcctcttcctctgaatcttcccgacgggatcatgatggt
cacaggcaggataagggtttaggggatcagtctaggatgagaaggccagagacacccaaa
tcctccagtaggggtgaacctgagtctaaacatggggttaaatctgaaagctcacgagac
cgagaaagggagaggaaacacagacatgagtctggtgaaaccagagagaggcggacatcc
gaagatcaaaaatctcgacccgagagtcctcgagttaaacaggagtcaaaaggagactct
agtaacagacatcgacctgacagacatgggattcgatctcctaacagcaaggatgagcgt
cggtcagatggaaatcgaaaccgtcctgattcacataaatcgcaacctgacaacaaggca
gagttccccagttacttactaggaggccgatcgggagtactaaaaaattttgtaattccc
aaaattaaacgggacaaggatggtaacatcactcaggaaataaaaaggtcgaatcttaag
caggagcacaaaggaaaggtggaaaagatgggtttggtggaggatttgaacaaaggagca
aagcccgtagtcgtccttcaaaagctaacatttgatgaggtccagaaattcattaaagag
aaacaggataggaatgctcggacttccaataaatccagcaaaaacaggccatcatcaaaa
tcaggaaaaggtggaatagaccaatctgttttaaaagatcttccgcctgagttgttggct
gaaattgaatcaactatgccactatgtgaacgggtcaagatgaataaaagaaaacgcagt
actgtcaacgagagaccaaaatatgctgaggtcagctcggaggatgacagtgagagtgat
gaagcctttgaatctcctcgaaaaaaacacaaaaaagacaaggataaagcttgggagtat
gaaggacatagagacaggcgaagctcaggggatcacaggaggagtagtttcctgcaagaa
ggaaggagaagctcaggcagtcgatacagagagcgaagccctgatgattctgaggatgat
tcacctcctccaagcctcagtgatattgccagaagaatgaagaaaaaggaaaagctgaaa
aaaaggaaagcttatgaacctaaactaacaccagaagaaatgatggactcctcaacattt
aagcgattttctgccagtgtagacaacattttggagaatttggaagatatggatttcaca
gccttagcggatgatgatgaaattccacaggagttattgttgggcaaacatcagcttaat
gaactgggtagcgagtctgctaaaattaaagccatgggaatcacatccaggctcccatca
gataagatggtcaaacttctaaatatcttggagaaaaacatacaagatggtgctaaactg
tcaacaatgatcaatcacgacaatgatactgaagatgaagagcgattatggagagatctc
atcatggagagagtaacaaaatcagctgatgcttgtctaactgctcttaatatcatgact
tctccccaaatgccaaaagcagtttatattgaggatgtaatagagagggttcttcaatac
actaaattccatttgcaaaacactctataccctcaatatgatcctgtttaccggattgat
cctcatggaggtggtgttctgacctctaaagcaaagcgtgcaaagtgttcaacacataag
caaagagtaatagtaatgctgtacaataaagtatgtgacattgtaagcaacatgtcagag
ctgcttgaaattcaactgctcactgatactacaatcttacaggtgtcctcaatgggaatt
acacctttttttgtagaaaacgtcagcgaactccaactatgtgccatcaaactggtgact
gctgtattttcaagatatgagaagcatagacaactgatactggaggagatcttcacttca
ttggcaagactgccgactagtaagcgaagtctaaggaacttcaggctaaatagcagtgac
gtcgatggtgagcctatgtatatacagatggttacagccttggttttgcagcttattcag
tgtgtggttcattttccagcgcagaaagatgccaatagtgaagaagaatatgacaaaaaa
gtagatcaagatgtgttgattataaactcctatgaaactgcaatgagaacagcacaaaac
ttcctatcagtctttctaaaaaagtgtggaagcaagcagggggaagaggattacagacct
ctctttgagaattttgtccaagatcttttatctactgttaacaaacctgaatggccagct
gctgagttgttgttaagtctgcttggaaggcttctggtgcatcagtttagtaataaacaa
acagagatggctctgagagttgcatcactggattatcttggaactgttgcagcaagactg
aggaaggatgcagtttcaagcaaaatggatcagtcatcaattgaccgaatacttaaacag
tcacctggaaacgatgaaatacaacagttgcagaaggcattactagattacctggatgag
aatgcagacactgatgcttcattagtctttgcaaagaaattttacattgcacaatggttc
cgggacactacaactgaaacagagaaggcaatgcggtcacagaatcaaaaagatgaggat
tcttcagagggcgctcatcatgcaaaagaagtacaaacaacaggagagataatgcagaag
gcagaagctcggaagaaattccttcgctcaatcataaaagctacgccatcacagtttagc
acattaaaaatgaattctgatacagtggattatgaggattcatgtttgattgtccgatat
ttggcctccatgaggccgtttgcacagagctttgatatttatttaacacagattctccgc
gtccttggagagaatgctattgctgttcgaactaaagccatgaaatgtttgtctgaagtt
gtagctgtggatccaagtatactggcaaggttggatatgcagcgtggggtccatggtcgt
ctaatggataactcaaccagtgtaagagaagcagcagtggaattactgggacgctttgta
ttaagtcgcccacagctaactgagcagtattatgacatgctaattgagaggatactggat
actggtatcagtgtcagaaagagagtaataaagattttacgtgatatctgtcttgaacag
cctacatttagcaaagttactgaaatgtgtgtgaaaatgatacgccgggtcaatgatgag
gaaggcattaagaaactggtgaatgaaacattccagaagctttggtttacgccaactcct
aatcatgataaagagacaatgacacgaaaaatacttaacattactgatgtggttgctgct
tgcagggacactggttatgactggtttgaacaattgcttcagaatcttttgaagtcagaa
gaggattcctcatataaaccagccaaaaaagcatgtgtacagcttgttgacaatctggta
gagcatatccttaaatatgaagaatctttagcagattcagaaaataaagctgtgaattct
aaccgtttggttgcttgcataactactctttacctgttcagcaagatcagggcacagcta
atggtgaaacacgccatgaccatgcagccatacctcactaccaagtgcaacactcaaagt
gacttccttgtcatctgcaatgttgcaaagatcttggagttggttgtaccattaatggag
catccaagtgagacttttctagtcacaattgaggaagatcttatgaagctgatttttaaa
tatggcatgacagtggttcaacattgtgtgagttgccttggagcaatagtaaataaagtt
acacacaactacaagtttgtctgggcatgttttaacagatactacggtgcaataataaag
ttcaaaatacagcaccaagaagatcctaatagcactgtcctcactgccaacaagcctaca
ctgctacgttctctcttcacagttggtgccttgtgcagacactttgattttgatcaagaa
gagttcaaaggaaaccaaaaggtggtgattaaagataaagtcttggaattgctgctgtat
tttacaaaacatgcagatgaggaggtacagacaaaggccatcattggattagggttttca
tttattcagcacccaaatttgatgtttgaacaagaagtaaagaatttatacaatggcatt
ttgtcagacaagaatagctctcttaacctaaagatccagattttgaaaaaccttcaaact
tatcttcaggaagaggacacacgcatgcaggaagctgacagagagtggaagaaactgtca
aagcaagaggatttaaaagaaatgggtgatatttcctcaggcatgagcagctctataatg
cagctgtacctcaaacaggtccttgaggctttctttcacacacagtcaaaagtgaggcac
tttgctctcaatgtgattgccttgacactaaaccaaggtctaattcacccagtacagtgt
gtaccatacctgatagccatgggcacagaccctgaacctacaatgaggaacaaggctgat
cagcagttagttgaaattgataagaaatacacgggttttattcatatgaaagctgttgct
ggaataaagatgtcctaccaagtacaacaagccatttgggcatcccatgatactattatc
agggggtttagacaagatgagaacagcactgctttgtgttcacatctctacaccatggtt
cggggaaatcgtcaacacagaagggcatttcttattgctctgctcaacctgtttgatgac
agtgcaaaaacagaagtaaacatgcttttgtatattgcggataatctagcatgtttccca
taccagacacaagaggagcctctcttcataatgcaccatattgacatcacgctttctgta
tcaggcagtaacctactacagtccttcagagagtctctattaaaggaggaaagggtgaag
gaaaaaacaaaaaaatacttctcagaagatgatgaggatgagcaaactagtgaaagtgag
gaggaagatgaggaagaagtggaggttagaagacctaagaaatcccggagaagggttaac
tccgactcagaatcagagtctgaaagtgactttgacgatgtggagcaagtaatgaatcga
ctaccagacagccccattcctctcattgaatttgctaacgcatcccaaggcatactactt
ctcttggttctgaagcagcatttgaagaatctttatggtttttctgacagtaaaatccag
aagtattctccaactgagtctgctaaaatatatgacaaagctgtaaaccgaaagtcatca
gtacattttagtcctcggcagacgatagaatttctgtcaaatgatatggcaaatgcagag
ttaacagatgaggttaagcggaagattgtgagacagtatcttgatttcaaattattaatg
gaacatttggaccctgatgaagaggatgaagagggtgaggcatcagcaagtgcaaatgcc
cgaaacaaagctataaatgcacttcttggaggaggaagtccaaaaaacaacactgctgac
actgaagatgatgagagtgatggggaagacaaggggggtgcttcagggtcaaaaagaccg
aagcggggagaatcggcagaagtcacgggtcagttgaatgaaactgtagaagccatggat
gttattgcaatttgctgcccaaaatacaaggacaggccacagattgccagggttatacaa
aagaccagcaatggctacagcgttcactggatggcaggttcttatagcggagcatgggca
gaggctaagaagcgagatggacgcaaactggtgccttgggtagacactataaaagaatcg
gacatcatttacaagaaaattgttctgacaagtgcacataagctgactaataaagttgtt
cagactttacgatcactgtatgcagctaaggatggaacttccagctaa
DBGET
integrated database retrieval system
