Polypterus senegalus (gray bichir): 120527557
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Entry
120527557 CDS
T08668
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120527557 (smarcad1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120527557 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
CUE
HHH_3
HTH_70
Motif
Other DBs
NCBI-GeneID:
120527557
NCBI-ProteinID:
XP_039607055
LinkDB
All DBs
Position
4:complement(102069480..102355220)
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AA seq
971 aa
AA seq
DB search
MSLINLDHFRYTKCQKKGESTNGCRSESPDSEKENKTETVVPETPESKRPTRFKRIKGEQ
FSDSDSDSDLTSRDEVNSVNEVASSKKNLNNSYPLEEFNYGCLKETDRVHSLEDLAKLKD
LFPNIDDGKLLEVMKSTSTLDGAVASCLMRFNNEVSDNKRKRKTDGSNNSDSEESVPFQA
RKKKKTAGNDDHESNVADPSDEWERHETILKRLQKKFPHLDMEELRDVLDQHNWSFNDAL
GVLKLFSDPVQESATLEARDNANKKDQADSSVDIKMQRKSVKDKSCFKLSNLKNETSNQS
LKLQESDLEDEDSVCSEFEKYSDTSDEQNDHEQKAKILKFLQDASLDELSLISRCSVKKA
QKIIELRPFKSWEDLFSKFTKANGLNEDIIWGCSDVLKEREVISKLMTRCDKISKKMTEE
VNQITMDYSSLGSIKQPALLTEKLQLKPYQLIGLKWLILLHKNQLSGILADEMGLGKTVQ
AISFLTYLYQKGDKGPHLIVVPSSTLDNWVRELNQWCPSLRVLVYYGSVEDRKYLRHDIM
SKAVDFNVVVSTYSLCISSADDRSLFRRLKLHCAIFDEGHMLKNMNSMRYKHLMTMKAEY
RLLLTGTPLQNNLLELMSLLNFIMPNTFSSSASEISKMFSMKTSEEQSIFEQERIAHAKQ
IMKPFILRRVKREVLDQLPAKEEIIKFCPMSKTQDNLYGSIFDQLKKSDKGDKKQLCNVM
MQLRKMANHPLLHRQYYTEDKLNQMSKLMLEEPTHRDANEHLIYEDMQVMSDFELHMLCK
KYCSLAFFQLENEKILDSGKFQVLQVLLREFKDRGDRIVLFSQFTMMLDIVEVFLNHLNY
RYLRLDGSTPMSERIHLIDEYNTDMNIFIFLLSTKAGGLGINLTSANVVILHDIDSNPYN
DKQAEDRCHRVGQTKTVQVMKLISKGTIEDCMLKISQKKLKLEQDMTAAEEGEEGSIPED
MATLLKASLGL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaataaatctggatcattttcgttacacgaaatgtcagaagaaaggagaatcg
actaacggctgtagatccgaaagcccagattcagaaaaggaaaacaaaacagaaactgtt
gttccagagacgccagaatctaaacgtccaaccaggtttaaaaggattaaaggagagcag
ttttctgattctgattctgactctgacctaacaagcagagatgaggtaaattcagtgaac
gaagtagcatctagcaaaaagaacctaaataatagctacccactagaagagttcaattat
ggctgccttaaagaaactgatagagtacattcattagaagatttagcaaagctgaaagac
ctgttccctaatatagatgatggtaaacttttggaggttatgaaatcaaccagtacttta
gatggggcagttgcatcttgtctgatgcgctttaataatgaagtttcagacaataaaaga
aaaaggaaaacagatggatcgaataatagtgactctgaagaaagtgtgccgtttcaagca
agaaagaagaaaaaaactgcagggaatgatgatcatgaatcaaatgtggcagatccaagt
gatgaatgggagaggcatgaaactattctgaaaagacttcagaaaaagtttcctcattta
gatatggaggagctgagagatgtccttgatcagcataactggtcttttaatgatgctttg
ggtgtcttaaaactgttttctgatccagtccaggaatctgctactttagaagcaagagat
aatgcaaacaagaaggaccaggcagacagttcagtggacataaaaatgcagagaaaatct
gtgaaagataagagttgcttcaaactttcaaatctgaaaaatgaaacaagtaaccagagt
ttaaagctgcaggaaagtgacttagaagatgaggactctgtatgctcagaatttgaaaaa
tattctgatacatctgacgaacaaaatgatcatgagcagaaggccaaaatactgaagttc
ttgcaagatgcctctctagatgagctctccttgatatcacgttgctctgtaaaaaaggct
cagaagattattgagctccgtccctttaaaagctgggaagatctgttttcaaagtttaca
aaagctaatggtttaaatgaagatataatctggggctgcagtgatgttcttaaagagaga
gaggtgatctcaaagttaatgacaagatgtgacaaaatatcaaaaaagatgactgaggaa
gtcaaccagattacaatggattatagcagtcttggaagtattaagcagccagcactttta
actgaaaaattacagctgaaaccatatcaacttattggattaaagtggttaattttgctt
cacaaaaatcaattaagtggcattcttgcagatgaaatgggtctggggaaaactgtgcaa
gcaatttcctttttgacatatctttaccaaaaaggcgataaaggaccacatctcattgtt
gtgccttcgtctacactagataattgggtgagagagcttaaccaatggtgcccttctctc
agggttctagtgtactacgggtcagtagaggaccgtaaatatctcaggcatgatattatg
agcaaagctgtggattttaatgttgttgtttctacgtattctctatgtattagcagtgct
gatgatcgtagtttattcagaagactaaaacttcactgtgcaatttttgatgagggtcac
atgctgaaaaatatgaattctatgcgctacaagcaccttatgacaatgaaagctgagtac
cgtttactgctcactggaacaccattgcaaaacaatttgttggaactgatgtccttgctt
aactttattatgccaaacacgttttcaagcagtgcaagtgagatctcaaaaatgttctcc
atgaaaacttctgaggagcaaagcatttttgaacaagaaagaatagcacatgctaagcaa
attatgaagcctttcattctgaggagagtcaagagggaggttttagatcagcttccagca
aaagaagaaataataaagttttgtcctatgtcaaaaactcaggataacctgtatggctca
atttttgaccaactgaagaaatctgacaagggtgacaagaaacaattgtgcaatgtaatg
atgcagcttcggaaaatggcaaatcaccctttacttcatcgccaatattacacagaagat
aagttaaaccagatgtctaaactgatgcttgaggagccaactcacagagatgcaaatgaa
catcttatctatgaagacatgcaagtaatgtcagactttgaattgcatatgttatgcaag
aaatattgtagtcttgcatttttccagcttgagaatgagaagatccttgattctggaaag
ttccaagttcttcaagttttgctcagagaattcaaagatagaggtgatcgcattgtactt
tttagccagtttacaatgatgctggatattgtggaagtttttctaaatcacttgaattac
agatatttaagattagatggttcaacccctatgtctgaaagaattcatcttattgatgaa
tataatacagacatgaacattttcattttcctgttatctacaaaagctggagggcttgga
ataaatctcacttctgcaaatgttgttattcttcatgatattgactctaatccttataac
gacaaacaagctgaagaccggtgtcatagagttggacaaacaaagactgttcaggtaatg
aagttgataagcaaaggaaccattgaagactgtatgctgaaaatcagtcagaaaaagctg
aaacttgaacaagacatgactgcagctgaagagggtgaggaaggatcaattcctgaagat
atggctactttactaaaagcaagcctgggcctttaa
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