Polypterus senegalus (gray bichir): 120527608
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Entry
120527608 CDS
T08668
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04020
Calcium signaling pathway
psex04144
Endocytosis
psex04510
Focal adhesion
psex04540
Gap junction
psex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120527608 (pdgfra)
04020 Calcium signaling pathway
120527608 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120527608 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120527608 (pdgfra)
04540 Gap junction
120527608 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120527608 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120527608 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psex04090
]
120527608 (pdgfra)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120527608 (pdgfra)
Protein kinases [BR:
psex01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120527608 (pdgfra)
CD molecules [BR:
psex04090
]
Proteins
120527608 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
ig
I-set
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
MBG_2
Motif
Other DBs
NCBI-GeneID:
120527608
NCBI-ProteinID:
XP_039607139
LinkDB
All DBs
Position
4:115804233..115845235
Genome browser
AA seq
1470 aa
AA seq
DB search
MGVFLKTFLNLGSLLTVMCADPQSIPAIFPNKDEMILKPSSSLSLSCSGEANVKWDMPNY
RNDMKIVEETKGLKHFATLLLSNVSASDTGFYTCMYADENSKTDVTSVYVFVADPEVPFI
VAEHPFDLHILPSPDKMEIPCRVTDPHTKVTLTNVDSGKEILSQYDNKRGFIGAFTAGTY
VCKATVNGVSVQSEEYIVHGGIDSFDFQVELDMMKTVVKEGEAITLTCVVSGTEICEQHW
EYPAKQDGRAQLNVKDDQKVEVIYTLNIPHASVKDSGLYECLVTQVTNSKTKVRKTNITV
YEKGFVNLSPMFDPVEFAELHEIKELIVNIEAYPDPVVTWQKNGNAVTEGNYAVTSTTVH
TEGIRYRNILRLIRIKEDDSGNYTIMVKNEDMEANLSVSLLVKSSQSPVLLQAPPMIYPP
GEELVIPLHSSFKLTCSGESEVEWDAEDKDNFTLKEEQDNSGLFVISLAVQNASASHTGY
YTCLYPSMNGSGYESIIYIYVPDPNVTFLPHVSPFSQHVLGAYEDTEIPCRVSDPEVHVA
LINAYTNMEVVDSLYDSKRGFIGVFPEGTYFCEATVDGVQHQSVEYIVHGWRETSELKVD
LQVDNTVVMEGEPITITCVARGSEMLEDFWKYPGKQANRGRKTVKENKKDVEISYTLTIP
QASVKDSGLYECSITQVMNELTQTRNVSITVYDKGFSRLESTFDQQEFADLHEVKEFKVL
IEAYPFPAVTWLKDSMVLSDENTEITSTLIKLNETRYQSSLLLIRAKEEDSGNYTIQVKS
GNESSSYTFSLQVKVPAVIVELMDLHHGSASGQSVVCIAGGLPTPDVEWFICKNIKHCAN
DTSQWMVLPANSTDVSTETHLTDESKVESQVTFAKLEHTLAVKCSAKNELAAVAREVKLV
SPSLRSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDP
MQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE
KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNREAFLNRH
PEKVKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADATQYVPMLEMKESSKYSDI
QRSNYDHPPSHKHKSLTETEVNNLLSDDNSEGLTLMDLLSFTYQVARGMDFLASKNCVHR
DLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSD
VWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMTKPEHATTDIYEVMMKCWNSEP
EKRPSFKCLRDTLESLLPDEYRKSYEKINHDFLKSDHPAVTRTQSHSDDAYIGVTYKNEN
KLKDRESGFDEQRLSSDSGYIIPLPDLDPLSDDEYGKRNRHSSQTSEESAIETGSSSSTF
IKREDETIEDIDMMDDIGIDSSDLAEDSFL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtctttttgaagacattcctgaatttgggaagtttgctaaccgttatgtgtgca
gatccgcagtctattcccgccatatttcccaacaaagacgagatgattttaaagccctct
tcctctctaagtctatcctgctcgggggaggctaacgtgaagtgggatatgccaaattac
agaaatgatatgaagatcgtggaagaaacgaaaggtcttaagcacttcgccactcttctt
ctgtctaacgtgtctgcatcagataccggcttctatacttgtatgtacgcggatgaaaac
tcgaagaccgacgtcacttcagtttacgtcttcgtcgcagatccagaagttccttttatt
gtggctgaacacccctttgatttacacattcttccctctccggataaaatggagattcct
tgtcgagttactgaccctcataccaaagttactcttaccaatgtggattcaggcaaggaa
atactaagccagtatgacaataaacgaggcttcatcggagctttcacggctggaacctat
gtctgcaaagccactgttaacggagtcagtgttcaaagtgaagaatatattgttcatgga
ggcatagactcatttgactttcaagttgagctagatatgatgaaaacagtggtgaaggag
ggcgaagccatcactttgacctgtgtcgtgtctggcactgaaatttgtgagcaacactgg
gagtatccagcaaaacaggatggaagagcacagttgaatgtcaaggatgaccaaaaggtt
gaggttatttacacccttaacattcctcatgcgtcagtgaaggacagtggcctttatgag
tgcttggtgacgcaagtcacaaatagcaagacaaaagtaagaaaaacgaacattacagtg
tatgagaaagggtttgtcaatttaagccccatgtttgacccggtagaatttgcagaatta
catgagattaaggagctcatagtaaacattgaggcttatcctgatcctgtagtgacctgg
cagaaaaatggcaatgctgtcaccgagggtaattatgctgtgacaagcaccactgtccac
actgaaggaataaggtacagaaatatattgagattgatccgaataaaagaagatgacagt
gggaactacacaatcatggtcaaaaatgaagacatggaagccaatctgagtgtctcttta
ttagtaaaaagttcacagtcaccagttcttctgcaagcacccccgatgatttatcctccg
ggagaagaacttgtgatcccacttcactcttcattcaaactgacctgctctggtgagagt
gaagtggagtgggatgcagaagacaaagacaacttcactctgaaagaagagcaggataac
agtggactttttgtgatctcccttgcggtgcaaaatgcttctgcctcccatacaggatat
tatacctgtctatatccatcaatgaatggctctggatatgaaagtatcatctacatctac
gttccagatcccaatgtcacttttctaccacatgtatctccattcagtcagcatgttctt
ggagcttatgaagatactgaaatcccctgccgtgtgtcagatccagaggtccatgtcgct
ctcatcaatgcatacacgaatatggaagtagtagacagtctatatgatagcaaaagaggc
tttatcggtgtcttcccagagggaacatatttctgtgaagcaactgttgatggtgtacaa
catcaaagtgtcgagtatattgtacatggatggagagaaacctctgagctgaaagttgat
ttacaagtagataacactgtagtgatggaaggggaacctatcacaataacctgtgtggcc
agagggagtgaaatgcttgaggatttctggaaatatcctggaaaacaggcgaatcgaggt
agaaagacggtgaaagagaacaagaaggatgttgaaatctcatatactctgacaatccct
caggcatctgtaaaagacagtggcctttatgaatgctctataacacaagtgatgaatgag
ttaacacagacaaggaatgtgtccattacagtttatgataaaggattttccaggttggaa
tccacatttgaccagcaggaatttgcagatctgcatgaagtaaaagaatttaaagtgctc
atcgaagcttacccattcccagcagtcacatggctaaaggacagcatggtgctcagtgat
gagaacactgaaatcaccagcaccctgattaagcttaatgagacacggtatcagagttcc
ttactgctgattcgtgcaaaagaagaggacagtggaaactataccatccaagtcaagagt
ggaaatgaaagctctagctacaccttttctttacaagtgaaagtaccagctgtaatagta
gagttaatggatttgcatcatggatctgcaagtggccagtcggtggtatgcattgctggt
gggctaccaacccctgatgtagaatggttcatctgcaagaatattaaacactgtgccaat
gacacttcacaatggatggtgctgccagcaaattcaacggatgtctccactgagacacat
cttactgatgagagcaaagtagaaagccaagtgacctttgcaaagcttgagcatactttg
gctgtgaagtgttcagcaaagaatgaactggctgccgttgcccgggaagtaaagttggta
tcgcctagtttacgctctgagttaactgtggcagcagcggtgctagtattattggtcata
gtcattatctctcttattgtgttggtcatcatctggaaacagaagcctagatatgaaatc
agatggcgggtgattgaatctatcagtcctgatggacatgagtacatctacgtggatcct
atgcagctcccttatgattcgagatgggaatttccccgagatggacttgtgctaggaaga
gttctaggctctggggcctttggcaaagtagttgaaggaacagcttatggactcagtcgc
tctcagcctgtaatgaaagtagcagtgaaaatgttaaaacctacagcaaggtccagtgag
aagcaggctctcatgtctgagttaaaaataatgactcatctgggtccccaccttaatatt
gtcaacttgttgggggcatgcacaaagtcaggtcctatttacattattacggaatattgt
ttttatggcgatcttgttaactacctgcataaaaacagagaggcttttttgaatcgacat
cctgagaaggtaaaaaaggaccttgacatatttggcatcaacccagctgatgaaagtact
agaagttatgtgattttatcatttgaaaacaaaggtgattatatggacatgaagcaggca
gacgctacccagtatgtaccaatgctggaaatgaaggagagttcaaaatattctgacatc
caaaggtccaattatgaccacccaccttcccataagcataagtctctaactgaaactgaa
gtaaataatttgctatctgatgataacagtgaaggcctcactttaatggacctgttgagc
tttacttaccaagtagctcgtggcatggatttcctggcttcaaaaaattgtgtccaccgt
gacctggcagcaagaaatgtccttctctctcaaggaaaaattgtgaaaatctgtgatttt
gggcttgccagggacatcatgcatgataacaactatgtctccaaaggaagtaccttcctt
ccagtaaaatggatggccccggaaagcatttttgacaatctctatacaaccctgagtgat
gtctggtcttatggcatcttattatgggaaattttttccttgggagggactccttatcct
ggcatggtggtggactccagtttctacaataaaattaaaagtggctacaggatgacaaaa
ccagaacatgcaactactgacatctatgaggtgatgatgaaatgctggaacagtgaacct
gaaaaaagaccatcattcaaatgtttaagagatactttggagtcattgttgccagatgag
tacagaaagagctatgaaaaaataaaccacgactttcttaaaagtgaccacccagcagtg
actcggacacagagtcattctgacgatgcttacattggcgttacttacaaaaatgaaaac
aaactgaaagaccgagagagtggctttgatgagcaaagactgagctctgacagtggttac
atcattcctctgccagatttggaccctctctcggacgatgagtacggcaagcgcaatcga
cacagctcccagacctctgaggaaagcgcaatcgagacaggatccagcagctccaccttc
attaaacgggaggatgaaacgattgaggacattgacatgatggatgatatagggatagat
tcatcagacttggcggaggacagtttcttgtaa
DBGET
integrated database retrieval system
