Polypterus senegalus (gray bichir): 120527687
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Entry
120527687 CDS
T08668
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04080
Neuroactive ligand-receptor interaction
psex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120527687
04082 Neuroactive ligand signaling
120527687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120527687
Ion channels [BR:
psex04040
]
Ligand-gated channels
GABA-A
120527687
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
OAD_gamma
Zip
Motif
Other DBs
NCBI-GeneID:
120527687
NCBI-ProteinID:
XP_039607318
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Position
4:complement(142823621..143079796)
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AA seq
557 aa
AA seq
DB search
MVSAKKEMVIAMSSSYISILIYFLCVTACIRKCSGHIKKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLN
NLMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQNSVEVPEESSSLVQYDLIGQTVSSETVKSIT
GEYIVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIEKAKKKTVKNPP
ASKPTPSKKSNENEEVQQNADTNGNLRKRMNYMTQTDPSNGQRVDSGSNNKDGIMRQPLV
GQVPSPGAPLSLLHSSPNPFSYVSATSPALPARSTPPAPPSTPTLPSRVPLNALVGPASI
QNLLGAKLEHIQTTANKMEIHLKQPSPSPAPSSPSPGAGTSKIDKYARILFPVTFGAFNM
VYWVVYLSKDTMESKEG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgattgcgatgtcctccagttacatttccattctg
atttactttctctgcgtgacagcatgcataagaaaatgttcaggacacatcaaaaaggat
gaaaagctataccccgaaaatttcacgcgcatattagaccgacttctggatggctatgac
aacagactgcgacctggattcggaggtccagttacagaagtcaaaaccgacatatatgtg
acaagctttgggccagtatctgatgttgaaatggaatatacaatggatgttttctttcgt
caaacatgggtagacaagagactgaaatatgatggccccattgaaatcctccggctaaat
aacctcatggtcaccaaagtttggacacctgacactttctttagaaatggaaaaaaatca
gtttcacataacatgacagctccaaacaagttattcaggataatgagaaatggtactatt
ctgtacacaatgaggcttacaataagtgcagagtgtccaatgagacttgtggatttccct
atggatggacatgcttgccctcttaagtttggaagctatgcatacccaaaaactgagatg
atttacacatggactaaaggaccccaaaactcagtagaagttccagaagaatcttctagt
ttggttcagtatgatctgattggacagacggtgtcaagtgaaactgttaaatccattaca
ggtgaatatattgtgatgacagtgtatttccatttgaaacgaaaaatgggctactttatg
attcagacatatataccatgcattatgacagtgatcttatctcaagtgtcattttggata
aataaagagtctgttcctgctagaacagtttttggtataacaactgtcttgacaatgaca
acactaagcatcagtgctcggcattccctaccaaaggtttcatatgctacagcaatggac
tggttcatcgctgtctgctttgcttttgtattctctgctctcattgaatttgcagctgtc
aactactttacaaatgctcaaatagaaaaggctaaaaagaagacagtaaaaaatccacct
gcatctaagcctacaccctcaaagaaatctaatgaaaatgaagaagtgcaacagaatgct
gacacaaatggcaatttgaggaaaagaatgaactacatgactcagacagatcccagcaat
ggacaaagagttgactctggaagcaataacaaagatggaattatgagacagcctttggtt
ggccaggtaccttcccctggtgctccattgtctttacttcattctagtcccaatccattc
agctatgtaagtgccacctcaccagctttaccagcaaggagcactcctccagctccacca
tcaacgcctactttgcccagtcgtgtgccattaaatgcactagttgggcctgcttcaatt
cagaatcttctaggtgctaagcttgaacatatccagaccacagcgaataaaatggaaata
catctaaagcaaccatcaccaagtcctgctccatccagtccttcgccaggtgctggaaca
agtaaaattgacaagtatgcacgcatactgtttccagttacctttggagcttttaacatg
gtgtactgggtggtatacttatccaaggacacaatggaatcaaaagaaggctga
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