Polypterus senegalus (gray bichir): 120527714
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Entry
120527714 CDS
T08668
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03015
mRNA surveillance pathway
psex04261
Adrenergic signaling in cardiomyocytes
psex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120527714
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120527714
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120527714
03036 Chromosome and associated proteins [BR:
psex03036
]
120527714
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120527714
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120527714
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120527714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
120527714
NCBI-ProteinID:
XP_039607385
LinkDB
All DBs
Position
4:148200313..148472327
Genome browser
AA seq
451 aa
AA seq
DB search
MLNTIQVLCSDITTLSLEAKQFASYTEADIISTVEFNQTGELLATGDKGGRVVIFQREPE
SKNEPNCQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANAHTYHV
NSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITAAEFHPYHCN
LFVYSSSKGTLRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYL
LTRDYLTVKVWDMNMENKPIETYQVHDYLRSKLCSLYENDCIFDKFECAWNGTDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCTGGKRRKDDISVDSLDFTKKIL
HTAWHPAENIIAIAATNNLYIFQDKVNSEVH
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataccatccaggtcctgtgttccgacatcaccaccctctctttggaagccaag
cagtttgcaagttatactgaagctgatatcatttcaacagttgagttcaaccagacggga
gaacttctggcaactggggacaaggggggacgtgttgttattttccaaagggaacctgag
agtaaaaatgagccaaactgccaaggggagtacaatgtttatagtaccttccagagccat
gagcccgagttcgattacctgaagagtctagaaatcgaggagaagatcaacaagataagg
tggctaccacagcagaatgctgcccacttccttctgtcaaccaatgataaaactattaaa
ctgtggaaagtcagtgaaagagataaaagaccagaaggttacaacttgaaagatgaagaa
gggaggctgaaggatttgtcaactgttacatctcttcaggtgccagttttaaaacccatg
gatctgatggttgaggtgagccctcggaggatcttcgcaaacgctcacacttaccatgtc
aactccatctctgtcaatagtgactgtgagacgtatatgtctgctgatgacctccggatt
aacctctggcatttagcgatcacagacagaagctttaacattgtggatatcaaacctgcc
aacatggaagatttaacagaagtgattacagctgccgagtttcatccataccattgtaac
ctttttgtttacagcagcagtaaagggacactgcgcctctgtgacatgagagcttcggct
ttgtgtgacaagcactcgaaactttttgaggagcctgaggatccaagcaatcggtcattt
ttctccgaaatcatttcctccatctcagatgtcaagttcagtcacagtggacgatatctg
ctaacgagggattacctcacagttaaagtatgggatatgaacatggaaaacaaaccaatt
gaaacttatcaggttcacgattacctccggagcaaactttgctccctatatgagaatgac
tgcatctttgacaagtttgaatgtgcatggaatggtactgatagtgtcatcatgactggc
gcttacaataacttcttcaggatgtttgaccgaaacacaaaacgtgatgtgactttggaa
gcctcacgtgagagcagcaagccacgggccgtgctaaaacctcgccgcgtctgcactgga
ggcaaacgtaggaaggacgatattagtgttgatagtttggacttcaccaagaagattttg
cacacagcctggcacccggcagaaaacataattgccattgcagcgacaaacaatctgtat
atatttcaggataaagtcaactcggaggtgcactga
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