Polypterus senegalus (gray bichir): 120527765
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Entry
120527765 CDS
T08668
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120527765 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psex00536
]
120527765 (slit2)
Glycosaminoglycan binding proteins [BR:
psex00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120527765 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRR_1
LRRCT
LRR_14
hEGF
EGF_TEN
EGF_DL_JAG
JAG1-like_EGF2
EGF_TGFA-like
EGF_3
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120527765
NCBI-ProteinID:
XP_039607493
LinkDB
All DBs
Position
4:158982732..159256041
Genome browser
AA seq
1537 aa
AA seq
DB search
MCALRSWYLALGLLLATGTAEGQPCPAQCSCSGTTVDCHGQGLRSVPRNIPRNTERLDLN
ANNLTRITKSDFAGLRHLRVLQLMENKISIIERGAFQDLKELERLRLNRNSLQVFPELLF
LGTTKLYRLDLSENQIQGIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN
NNNITRLSVASFNHMPKLRTFRLHSNSLHCDCHMAWLSDWLRQRPRVGLYTQCMSPAHLR
GHNVAEVQKKEFACSDDEEGHQTSASCSVLQCPDACTCSNNIVDCRGKSLTEIPTNLPET
ITEIRLEQNAIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFALQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFASLRA
IQTLHLAQNPFICDCHLKWLADYLHENPIETSGARCTSPRRLANKRIGQIKSKKFRCSAK
EQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTRIPEHIPQYTAELRLN
NNEFTVLEATGIFKKLPQLRKINLSSNKITDIEEGAFEGATGVNELILTSNRLESVHFRM
LKGLNGLRTLMLRSNRISCVGNDSFTGLSSVRLLSLYDNQITTMAPGAFDTLHSLSTLNL
LANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAIQDFTCDDGNDDNSC
SPLSRCPNECTCLDTVVRCSNKGLKALPKGIPKEVTELYLDGNQFTQVPKELSNYKHLLL
IDLSNNHISTLSNQSFSNMTELLTLILSYNRLRCIPVKAFDGLKSLRLLSLHGNDISVIP
EGAFHDLSALSHLALGANPLYCDCNMQWLSDWVKSGYKEPGIARCTGPGEMTDKLLLTTP
SKKFTCQGPVDVSILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHAC
ISSPCQNGGTCDLKDGEKEGFWCTCADGFEGESCQINIDDCEDNDCENNSTCVDGINNYT
CQCPPEYTAANQNEVEKGELCEEKLDFCAPELNPCEHDSKCILTLKGYKCECTPGYVGEK
CDVDYDDCNENKCKNGAQCIDAINGYTCVCPEGYSGLFCEFPPPMVLPRTSPCDNFECQN
GAQCIFKDAEPNCQCLPGYQGEKCDKLISVNFVNKESFLQIPSPNIHTQANITLQIATDE
DNGILLYKGDKDHIAVELYRGRVRVSYDAGSIPSSAIYSAETINDGNFHVVELIAIDQTL
SLSIDGGSPKSITTLAKQSTLSADSPLYVGGMPAKTNVAALRQGPGQNGTSFNGCIRNLY
INDELQDFNRVPLQRGILPGCEPCQKNLCVHGTCHTTGHSGFSCECEGGWIGQLCDQQAN
DPCLGNKCIHGTCMPINAFSYSCKCQQGYGGVLCDEEEELFNPCQSLKCKNGKCRLSGLG
KPYCECNSGYTGDSCDREIFCRGERVRDNYQKQQGYAACQTTKKVSRLECRGSCSNGQCC
GPLRSKRRKYTFECTDGSSFVEEVEKIIKCGCSKCPS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcactgcggagctggtaccttgcgctggggttgctactcgccactggaactgcg
gaggggcagccctgcccggcccaatgctcctgctccgggactaccgtcgactgccacggg
caaggacttcgcagtgtgccgcgaaacatccctaggaatacagaaagactggatttgaat
gcaaataatctcactagaatcacaaaatctgattttgctggcttgaggcacctccgtgtt
ttgcaacttatggaaaacaaaatcagcattattgagagaggagcattccaggatctgaaa
gaactggagagattacgtttgaacaggaatagtctacaagtattcccagaacttcttttc
ctggggacaacaaagttatacagattagatctaagtgagaatcaaattcaaggcatacca
agaaaggcattcagaggtgcagttgatataaaaaatctgcaactggattacaaccagatc
agctgtatcgaagatggggcattcagagctctgcgagacctggaagtgcttacactcaac
aacaacaatatcacccgtttgtccgtggcaagcttcaaccatatgccaaaactcaggacc
ttccgccttcattcaaacagtcttcactgtgactgccacatggcttggctttcggactgg
ctgcgacagcgaccccgtgttggactttatactcagtgcatgtcacccgcacacctaaga
ggtcacaatgtagctgaggttcaaaagaaagagtttgcttgctcagatgatgaagaaggt
catcaaacatctgcatcatgcagtgtgttacagtgtccagatgcatgtacatgcagcaac
aacattgtagactgccgaggcaagagccttacagaaataccaaccaatcttccagaaacc
atcactgaaattcgcttggagcaaaatgcaattaaggtcatccctcctggagctttctca
ccatacaaaaaactgcgaagaatagacttaagcaacaaccagatatctgaactagcacca
gatgctttccaaggcttacgttccctcaactcactagtgctttatggaaataaaattaca
gaacttcctaaagggctttttgaaggactctttgcacttcagttgctgctcctaaatgct
aacaaaattaactgtctaagagtggatgcatttcaagatttgcataacctgaacctgctc
tccttatatgacaacaaactacagactattgccaaaggcacatttgcatctcttcgggca
attcagactctgcacttggctcagaacccatttatctgtgactgccatctgaagtggctt
gctgattaccttcatgaaaatccaattgagacaagtggtgcccggtgtacaagcccaagg
aggctggcaaataaaaggattgggcaaatcaaaagcaagaaattccgatgctcagcaaag
gaacaatatttcattccaggcacagaggattacagatcaaagcttggaggtgattgcttt
gcagatctggcttgcccagaaaaatgcagatgtgagggaacaacagtggattgttcaaac
cagaagcttaccagaattccagaacacattccacagtacacagctgagctgcgtttgaac
aataatgaattcacagtccttgaagcaactgggatttttaagaagctccctcagctccgc
aaaataaatctaagcagcaacaaaatcacagatatcgaagaaggagcttttgagggagca
actggagtgaatgaattaattttaaccagcaatcgtctagaaagtgtgcactttagaatg
ctcaagggccttaatggactgagaaccctgatgctgagaagcaatcgaattagctgtgtt
ggcaatgacagcttcactggtctgagttcagtgcgtttactatccttgtatgacaaccag
ataaccaccatggcacctggagcttttgacaccctccattcactttctacactaaatctt
ttggctaatcctttcaactgcaattgccatttggcttggttgggagactggttaagaagg
aagagaattgtaactgggaatccacggtgtcagaatccttactttttgaaggagataccc
attcaagatgtagcaattcaggatttcacctgtgatgacggtaatgatgacaacagctgt
tcacctctttcacgctgccctaatgaatgtacttgtctagatactgtagtgcgttgcagt
aacaaaggactcaaggctctacccaagggtatccctaaagaagttactgagctctatttg
gatggaaaccagttcacccaggttcccaaggagctgtctaattacaagcatttattactc
attgatttaagtaacaaccacatcagtactttgtccaatcagagcttcagcaacatgact
gaactgcttaccttaattctgagctacaaccgactgagatgtattcctgttaaggccttt
gatggactgaagtcccttagattgttgtctctacatggtaatgacatctcggttattcct
gaaggagcctttcatgatctttcagcactgtcacacctagctcttggtgccaacccccta
tactgtgactgtaacatgcaatggctttctgactgggtgaaatcagggtataaagaacct
ggcattgctcgttgcactggacctggagaaatgacagacaaactgttgctcacaactccg
tctaagaaatttacctgtcaaggaccagttgatgtcagcattctcgccaaatgcaaccct
tgcctgtcaaacccctgcaaaaatgatggtacatgcaacaatgatcctgtagatttctac
agatgtacatgcccgtatggatttaaggggcaggattgtgacattcctattcatgcatgt
attagcagcccgtgtcaaaatggaggaacatgtgatttaaaggatggggagaaggaagga
ttctggtgtacttgtgcagatgggtttgaaggtgaatcgtgtcagattaacattgatgat
tgtgaggacaatgattgtgaaaacaattctacttgtgtagatggaatcaataactataca
tgccagtgtccacctgaatatacagctgctaatcagaatgaggtggaaaaaggtgaatta
tgtgaggaaaagctagatttctgtgccccagaactgaacccctgtgaacatgactccaag
tgcatcctgacacttaaaggatacaaatgtgagtgcacaccaggttatgttggtgagaaa
tgtgatgttgactatgatgactgcaatgaaaataaatgcaaaaatggagcacagtgtatt
gatgcaataaatggatatacgtgtgtatgtcctgaaggatacagtggactcttctgtgaa
tttcctcctccaatggttttgccacgtacaagtccttgtgacaattttgaatgtcaaaat
ggagcacagtgtatttttaaagatgcagaaccaaactgccagtgtttaccaggataccaa
ggagaaaaatgtgacaagcttattagtgtgaactttgtgaataaagagtcttttctccag
attccatctccaaatatccacactcaggcaaatatcacattacagattgctacagatgaa
gataatggaattttgctttacaaaggtgacaaagaccacattgctgttgaattataccgg
ggacgagtgcgtgtcagttatgatgctggctctattccttcctctgccatctacagtgcg
gagacaataaatgatgggaattttcatgttgtggaactgattgctattgaccaaacactt
tcgctgtccattgatggaggaagtcctaaaagcatcaccacactggctaagcagtcaaca
cttagtgctgactctcctctttatgtaggaggaatgcctgctaaaacgaatgtggcagca
ctgcgtcaaggccctggacaaaatggtactagtttcaatggttgcattcgcaatttatac
attaacgatgagcttcaggacttcaacagagtaccattgcagagaggaatcttaccaggc
tgtgaaccttgccagaaaaacctttgtgtacatgggacttgccatacgactggccattct
gggtttagctgtgaatgtgaagggggatggataggacaattatgtgaccagcaagccaat
gacccctgccttggaaacaaatgtattcatggcacctgcatgcccatcaatgctttttca
tacagttgtaagtgtcaacaaggttatggaggagtcctgtgtgatgaagaagaagagctt
ttcaacccgtgtcagtctttaaagtgcaagaatggaaaatgccgactttctgggcttgga
aagccttattgtgaatgcaacagtggttacacgggagacagctgtgaccgagaaatcttc
tgtcgaggggaacgagtcagagataactatcagaaacaacaaggctatgcggcgtgtcag
acgaccaaaaaggtctcacgattagaatgtcgaggcagttgctccaatgggcagtgctgt
ggacccttgaggagcaaacgacggaaatacacctttgaatgcaccgacgggtcttctttt
gtggaggaagttgaaaaaatcatcaagtgtggctgttcaaaatgtccttcgtaa
DBGET
integrated database retrieval system
