Polypterus senegalus (gray bichir): 120527774
Help
Entry
120527774 CDS
T08668
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120527774 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120527774 (dhx15)
03009 Ribosome biogenesis [BR:
psex03009
]
120527774 (dhx15)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120527774 (dhx15)
Spliceosome [BR:
psex03041
]
Complex A
U2 snRNP components
U2 related factors
120527774 (dhx15)
Complex B
120527774 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120527774 (dhx15)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
Helicases
120527774 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Atrophin-1
Flavi_DEAD
SRP54
AAA_25
AAA_29
AAA_7
T2SSE
AAA_30
Motif
Other DBs
NCBI-GeneID:
120527774
NCBI-ProteinID:
XP_039607521
LinkDB
All DBs
Position
4:complement(163262600..163320390)
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRISSEGKDRDRDREKDDRPKDRERDRDRDRDRDRDREKDLKP
SGISLNPVMAGPGIPPLRQAAVNQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNEI
LTKHQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEM
DVMLGQEVGYSIRFEDCSSSKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLAT
DILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPER
DYLEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLY
STLPPQQQQRIFEPPPPKKHSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNP
RIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGS
VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDP
QLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLN
VYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINI
RRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRT
CTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagacaccgattggatttgggagatgattattcgtcaagcaaaaagaggatt
tcatctgaaggaaaagatagagatcgtgacagagaaaaagatgatcgtccaaaggacaga
gaaagagacagagatcgtgacagagatcgtgatcgagacagagaaaaggacttaaaacca
tctggtatttcattgaatcctgtcatggcaggacctggaataccacctttaagacaagcg
gcagttaatcaacaaatcaatccatttactaatttgcctcatactcccaggtactacgag
atcctcaaaaagcggcttcagttacccgtgtgggagtacaaagaaaggtttaatgaaatt
cttacaaaacatcagagctttgttctggttggtgaaactggctctggcaaaacaacacag
attccccagtggtgtgtggatatggtgcgagccctacctggccccaaacgtggtgtggct
tgcacccagccaagaagagtggcagccatgagtgtagctcagagagttgcagatgaaatg
gatgtcatgcttggtcaagaagttggatattcaattagatttgaagattgcagcagttca
aagactattctcaagtatatgactgatggaatgttgcttcgagaagcaatgaatgatcct
ctcctggagcgttatggcgtcattattcttgatgaagcccatgagcgaacactagccaca
gatattttaatgggagttttaaaagaagttgttcgtcaaagatcagatctcaaggtcatt
gttatgagtgctactttagatgctgggaaattccaggtttactttgataactgtccacta
ttaaccattcctggtcgcacacatccagtggaaattttctatactcctgaaccagagaga
gattacctggaagcagctatccgaacagtaatacagatccatatgtgtgaggaggaagaa
ggtgatgttcttctgtttcttactggacaagaggaaattgatgaggcctgtaagcgaata
aaacgtgaaattgatgacttgggacctgaagttggagacataaagattattcctctttat
tccacattaccaccacagcagcagcaaagaatttttgagccacctccacccaaaaagcac
agtggagcaattggtcgaaaggtggtcgtttctactaatattgcagagacatctctaaca
attgatggtgtcgtctttgttattgatcctggctttgccaaacaaaaggtatataatcca
cgaatcagggttgagtctttgctggtcactgccatcagcaaagcttcagctcagcagaga
gcagggcgtgctggaagaacccgaccaggaaagtgtttccgtctgtatacggaaaaggcc
tataaaacagaaatgcaggacaacacctatcctgaaattctgagatctaatttgggatca
gttgtactgcagttgaagaaacttggtattgatgacttggtgcattttgattttatggac
ccaccagctcctgaaacactgatgagagctttagaactactaaattaccttgctgctctt
aatgacgatggagatttgacggagctgggctctatgatggcagagtttccattggatcca
cagctggctaaaatggtcattgctagctgtgaatttaattgttccaatgagatcctctct
atcactgcaatgctgtcagtcccacagtgttttgttcgtccaacggaggctaagaaagct
gctgatgaggcgaagatgaggtttgcgcacatagacggagatcacttgactctacttaat
gtctaccatgcattcaaacaaaaccatgagtcggttcagtggtgttatgacaacttcatt
aactaccgatcacttatgtctgctgacaatgtacgccagcaactctccagaataatggac
agattcaatttacctcgtagaagcactgaattcactagtcgagattattatattaacatc
agaagagcactagttactggcttcttcatgcaggttgctcatttggaaagaacagggcat
tatctgacagtgaaagataaccaagtagtacagttgcatccgtctacagttcttgatcac
aagcctgagtgggtgctatacaacgaatttgtcctcacaaccaaaaactacattcgaact
tgcacagatataaaaccagaatggttggtgaaaatagccccacaatactatgaaatgagc
aacttcccacagtgtgaagcgaaaagacagttagaacgcatcgttgccaaacttcagaca
aaggaatattcacaatattga
DBGET
integrated database retrieval system
