Polypterus senegalus (gray bichir): 120527823
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Entry
120527823 CDS
T08668
Symbol
nocta
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120527823 (nocta)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
120527823 (nocta)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120527823 (nocta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120527823
NCBI-ProteinID:
XP_039607606
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All DBs
Position
4:complement(169922373..169946149)
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AA seq
443 aa
AA seq
DB search
MYQSPVRLCTSLLQREVQVIYTASLSSPFKKAFGIQEVPPVQFCHTVCSDSLSAGKAVST
TASVATTGPAPLAVTSRSVCSMGANTSRLYSALAQTLRSSQYDQAEEYPDQAVDVEPIDP
DCLLEECKEMLRNRPPRPHRTFKLPGSQSSKYPPIRVMQWNILAQALGEGKDNFIQCPQE
ALNWAERKYLILEEILLYRPDVLCLQEVDHYFDTFQPALSSLGYHCTFYPKPSSPCLDVE
HNNGPDGCALFFNKDRFELLDSTNIRLIAMMLKTNQVAIAQTLRCRETGHIFCVAVTHLK
ARSGWERFRSAQGSHLLQSLQSITEGTSIPLLVCGDFNAEPSEDVYKSFATSSLNLNSAY
KLLSSDGQSEPPYTTWKIRPSGESCHTLDYIWYSQHAFNVDSLLCFPTEEQIGPNRLPSL
SYPSDHLSLVCDFSFSDEPDRLL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaagtccggtccgtttgtgtacatccctgctgcaaagagaggtccaggtaatc
tacacagcctccctgtcttctcccttcaaaaaggctttcgggatccaagaggtgccacca
gtccagttctgtcacaccgtctgctctgacagcctcagtgctggaaaggcggtgagcacc
acggcctcggttgctacgacggggcccgccccgctggcggtcacttcaagaagcgtgtgt
tccatgggcgctaacacaagccgtctttacagtgcccttgcccagacgttaaggagcagt
cagtatgaccaggcagaagaataccctgaccaagctgtagatgtggagcctatagatccc
gattgcctccttgaggaatgtaaagagatgctgcgcaacaggccacctcggccacacagg
actttcaagttaccaggcagccaatccagcaagtatccacccattcgagttatgcagtgg
aatatacttgcacaagcacttggtgaaggcaaagataactttattcagtgtccacaggag
gctctgaactgggccgaacgcaagtatctaatcctggaggagattttgttgtatcggccg
gatgtcttgtgcctgcaagaagtggatcattactttgacacgttccagccagccctgagc
agccttggctaccactgcactttctacccaaaaccctcttcaccttgcctagatgtggag
cacaacaatggccccgacggctgtgccctgttttttaataaggacaggtttgagctgctg
gacagcaccaacatacgcctaatagccatgatgctgaagacaaatcaggtagcgattgct
cagacgttacggtgcagagagacgggccacatcttctgtgttgcagtgactcacctgaaa
gcgcgcagtggctgggagagatttcgctctgcccaaggctcccacctcctgcaaagctta
cagtccattacagaaggaacaagcatccccttgttagtttgtggggactttaatgctgag
ccttcagaggacgtgtacaagagctttgccacctccagccttaacctgaacagcgcatac
aaactacttagcagtgatggccagtctgaacctccttatacaacctggaagatccgtcct
tccggggagagctgccacactctggattacatctggtactctcagcatgccttcaacgtg
gactcccttctctgcttcccgactgaggagcagataggaccaaacaggcttccatcattg
agctatccgtcagaccacctgtccctagtgtgcgatttcagcttcagtgacgagcccgat
agacttttgtaa
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