Polypterus senegalus (gray bichir): 120527940
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Entry
120527940 CDS
T08668
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120527940 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120527940 (dysf)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
Ferlins
120527940 (dysf)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120527940 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
120527940
NCBI-ProteinID:
XP_039607853
LinkDB
All DBs
Position
4:209102001..209464566
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AA seq
2117 aa
AA seq
DB search
MLRVFILSAGNVQTPDTDISDAYCSVLFQGVKKKTKVIKNNVNPVWNEGFEWDLKGIPLD
ASSELHVVVKDHETMGRNRFLGEARLPLREVLSSSSLAASFNAPLLDSKKQSTGATILLQ
ISYIPPPGAAPVFSPPAPPEAQHGPIELDSVTDTAGEEETEDQAESVEEAEPAEETPPQE
PTAPLPKKTPANGVQGIKKRRKTQKQPLSNKPQDFQIRVRVIEGRQIPGVNIKTVVKVTV
AGQTKRTRIRKGNSPLFDETFFFNFFESPSELFDEPVFITVFDSRSLRTDAVIGEFRLDV
GTVYSEPKHAFLRRWLLLSDPDDLSAGAKGYLKVSLFVLGPGDEAPVEKKEISDDKEDIE
GNLLRPAGLALRGAHFTMRVYRSEDLPQMDDAFLDGMKQIFGFDSNRKNLVDPFVEVKFA
GKTICTKVLEKNANPEWNQSLILPIRFPSMCEKMRIRAIDRDWSSQNDVIGTSFLCMSKI
SAPGGEIEDEMPPVTSSQARMDDSLGFLPTFGPCYVNLYGSPREFSTFTDPYEHLNLGKG
EGVAYRGRVLLELDTKLVDHTEQKVEDIPSDNLLVVEKFMRKRRYCLFAAFYSATLLQDV
DDAIQFEVSIGNYGNKFDNSCLPLASTTQFSRAVFDGCHYYYLPWGNIKPVVVLSSEWED
IKFRTDALNMLLHIADRLEANLEQMQLEIKSNMSEEAVNIQMEQLLDDVISDCSLELPDL
QQWPCTTPLDKYLYRFRKANLIQIQQLALQLKHGNGTDPSAVVEQAEDWLLRLRNIAEEP
QNSLPDIIIWMLQGDRRVAYHRIPAHEVLFSKNKNGARFCGKYCGQLQTIFMKFPQGGGK
EFKIPVQVRLRVWFGLSTDAKEFNQFAEGKLSVFAETYENQTKLALVGNWGTTGLTYPKY
SDVTGKIKLPKDSFRPSHGWTWVGDWFISPEKTLLFDSDAGHMTFMEEVFENQMRLPGRQ
WIGMSECFTDVNGEKALPKDETECPPGWVWVDEEWSTDLNRAVDDEGWEYGITIPPDRKP
KSWVPAEKMYHTNRRRRWVRLRRRDPKQLDALKKQRPDDIDREGWEYASLFGWKFHLKPR
KTDSFRRRRWRCRMEPLEKTGAAAVFALEGSLGGMIDEKSDDKSVTQSFGVNRPTISCMF
DSGTRYHLRCYMYQARDLIAMDKDSFSDPYAIVSFLHQSQKTVTIRSTLNPTWDQTLIFY
EIEIFGDPQANEQNPPNIVVEIYDQDTYGADEFMGRCICKPTLQLLPSLSWHPITRGQRN
AGELLAAFQLIRREKPAVHHIPGLEGEFIPISTLDELCIPGFFHENLQQWPADSSLPPPP
PLKEPNVFMVPQGIKPVLQRTGIEILAWGVRNLKPFQLASVSSPSLMVECGEKMVQSCVI
RNCKKKPNFDINVLFMEVLLPCEKLYSPPITVKVIDNRQFGRKPVVGQCTIRSLEEFYWD
PNRTEREYYELQPDEVSLTPRDEVLIDIDDKEPLIRDQPADSVTSSAAINLTSSASSLHL
KMKWEEEFIDWWSKFYASTGERAMCGSYLEKGFDTLKVYNTELEKTEDFEGLTDFCQTFK
LYRGKSQDDNEDPSVVGEFKGMFKIYPLPDDPSMPPPSRQFRQLPPNGLEECLVRVYIVQ
ATGLQPKDANGKCDPYVKISLGKKSVSNQDKYIPCTLDPVFGCMFELSCVLPLEKDLKVI
LYDYDLLSKDEKIGETVIDLENRFLSKYGARCGLPLTYCLSGVNQWRDQLKPSQLLHRFC
ERWNFKLPVYKDDRIIFRGHEFTLADLEDSKPSNPHLGPACECLALYVLRRQGLVPEHVE
TRPLYSPLQPDIEQGKLQLWVDLFPKSLGPPGPPFNITPRKAKRLFLRCIIWNTNDVILD
DVSITGEKMSDIYVKGWVFGYEENKQKTDVHYRSLGGEGNFNWRFVFPFDYLPAEQVCIV
NKKEHFWSLDKAETKISPKLVVQIWDNDKFSFDDYLGSIEMDLNKMVRPSKTPEKCTLTM
LEQLQDPKKLVSLFEQKTMRGWWPCVGEANGEKIIAGKVEMTLEIVSEPERDERPAGLGR
DEPNMNPHLEEPKRPETSFLWLSSPFKTMKYILWRRFKWVIIGIIILCILLLFIGVFLYS
FPNYAAMKLVSPFSRAQ
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagtgttcatcctcagcgctggcaacgtgcagacccctgacacggacatcagc
gatgcctactgcagcgtccttttccaaggagtcaagaagaagaccaaagtcattaagaat
aatgtgaatccagtatggaatgagggatttgaatgggacctgaaggggataccattggat
gccagctctgaacttcatgtggtggtgaaagaccatgaaactatgggaaggaatcggttt
cttggagaagcacggctgcccctaagggaggtcctctcttcctccagtctagctgctagt
ttcaatgctcctttactggacagcaagaagcagagcacaggggctactatccttcttcaa
atctcctacatccccccacctggagcagcaccagtgttttcccctcctgctccgcctgaa
gctcaacatggccctattgaactcgactctgttactgatacagccggtgaagaagaaact
gaagaccaagctgagagtgtagaagaggcagagccagcagaggaaacaccaccacaagag
ccgacagcccctctacctaagaaaactcctgcaaatggcgtgcaggggatcaagaagaga
agaaaaacccaaaagcagcccctctccaacaaaccccaggacttccagattcgggtccgt
gttatagaaggccgacagattccaggtgttaatatcaaaacggtagtcaaagttactgtg
gcagggcagacaaaaaggacaagaattcgaaaggggaacagcccattgtttgatgagact
tttttctttaatttttttgaatctccttctgagctgtttgatgagccagtcttcatcact
gtgtttgattcacgttctcttcgcacagatgctgtgattggagaatttcggcttgatgtg
ggtacagtttactccgagcctaaacatgccttcctcaggcggtggcttcttctttctgac
ccagatgacctgtctgctggggctaaaggctacttgaaagtcagtctctttgtccttggt
ccaggagatgaagcaccagttgagaaaaaggaaatctcagatgataaagaagacattgag
gggaacttgctgcggccagctggtctggctttgagaggagcccatttcacaatgagggtg
tacagatctgaggatctgccacagatggatgatgcctttttagatgggatgaagcaaata
tttggttttgacagcaaccggaagaaccttgtggacccctttgttgaagtcaaatttgct
ggaaagacgatttgtaccaaagttcttgagaaaaatgcaaatccagagtggaaccagagc
ctcattttgccaattaggtttccctcaatgtgtgaaaaaatgagaattcgtgcaatagat
cgggactggtcaagccaaaatgatgtgatcggcaccagcttcctctgcatgtccaaaatc
tcagccccaggaggagaaattgaagatgaaatgcctccagtgacctccagccaagccagg
atggatgacagtcttggcttcctgcccacatttggtccttgctatgtcaacctgtatggt
agtccacgagagttcagcaccttcactgacccctatgaacacctaaaccttgggaaggga
gagggagtggcataccgaggcagagttctcttggaactggacacaaaactggtggaccac
actgaacaaaaagtggaggatattccttcagataatttattagttgtggagaaattcatg
cgaaaacgcaggtactgcctttttgcagctttctattctgccacactgctacaagatgtg
gatgatgccattcagtttgaggtcagcattggtaactacggtaacaaatttgacaacagt
tgcctgccgttagcatctaccacacagtttagccgcgctgtctttgatggatgccattac
tattacctgccctggggcaacatcaaaccagttgtggtcctgtcatcagagtgggaagac
atcaaatttcgaacagatgcactgaacatgttgctgcacattgcagacaggctggaagcc
aatctagaacagatgcagctggaaatcaaatcaaacatgtcagaagaagctgtgaacatc
caaatggagcagctgctggatgatgtcatcagtgattgcagtttggagctccctgaccta
caacagtggccctgcactactcccttagataaatacttatatcgttttcgaaaagcaaat
ctaattcagattcagcagctggctctgcagctcaaacatggcaatggcactgacccgtct
gctgtagtcgaacaggctgaggactggctgctccgactgcgtaatattgctgaagagcct
cagaattctttgccggacatcatcatctggatgcttcagggggatcggcgagtggcctac
cacagaatcccagctcatgaggttctcttctccaagaacaaaaatggagcaaggttttgc
ggcaaatactgtgggcagctacaaaccatcttcatgaagtttccacagggaggcggtaaa
gagtttaagatccctgtacaggtacggcttcgagtgtggtttggactctccacagatgca
aaagaattcaaccagtttgctgaaggcaagctctctgtgtttgctgaaacgtatgaaaac
caaaccaaattggcacttgtgggtaactggggtacaactggcttgacataccctaaatac
tctgatgtgactggaaaaattaagcttcccaaagacagcttccgtccctcacatggatgg
acctgggtgggagattggtttattagcccagagaagacacttctctttgactctgatgct
ggtcacatgaccttcatggaagaggtgtttgaaaatcagatgcgattgccagggagacag
tggatcggcatgtcagaatgcttcacagatgtgaatggtgagaaagccctgcccaaagat
gagactgagtgtcctcctggctgggtttgggtggatgaagagtggtcaacagatctcaat
agagctgtagatgatgaaggctgggagtacggcatcaccattcctccagaccgcaagccc
aaatcatgggttcctgccgagaagatgtaccacacaaatcgccgaagacggtgggtccgg
ttacgccgtagagaccctaagcaattggatgctctgaaaaagcaacgccctgatgacatc
gatcgtgaaggatgggagtatgcgtctctttttggctggaagttccacctcaagcctcgc
aaaacggacagtttccggcgacgtcgctggcgctgccgcatggagcctctggaaaagact
ggtgctgctgcagtctttgccttggaaggctctctgggtggaatgatagatgaaaaaagt
gatgataaatccgtaactcagagttttggagtgaaccggccaaccatctcttgcatgttt
gatagtgggactcgttatcatttgcggtgctacatgtatcaggcacgtgatctcatcgcc
atggacaaggacagtttctcagatccctatgccattgtctcattccttcaccagagccag
aagacagtgacaatccgcagcactcttaatcctacttgggatcagaccctcattttctat
gagatcgagatctttggtgaccctcaggctaatgagcaaaatccacccaacattgtggta
gaaatctacgatcaggacacttatggtgcagatgaattcatgggacgctgcatttgcaaa
cccactttgcagttgctaccaagcttatcatggcatccaatcaccaggggccagaggaat
gcaggggaactgttagctgccttccagctgattcgtagagaaaagccagcggtccatcac
attccaggtctggagggggaattcattcccatttccacgctggatgagctgtgtattcct
ggtttcttccatgaaaatcttcagcaatggcctgcagattccagccttcctcctcctcca
cctctgaaggagcccaacgttttcatggtgccacagggcatcaagcctgtcctgcagcgc
acaggcattgagatccttgcatggggagtgcgaaacttaaaacctttccagttagccagt
gtttcatcacccagccttatggtggaatgtggggaaaagatggttcagtcatgtgtgatc
cgcaactgcaagaagaagcccaactttgatatcaatgtgctttttatggaagtgctgctg
ccttgtgaaaagctgtacagtcccccgattacagttaaggtgatcgacaacagacagttt
ggcagaaaacctgtcgtcggacagtgtaccatccgatctttagaagaattctactgggac
cctaacaggactgagcgagagtattatgaacttcagccagatgaggtgagtcttacccct
cgagatgaggtcctcattgacatcgatgataaggagccacttattagagaccagccagca
gacagtgtgacaagctcagctgctattaaccttacatcctcagcatccagcctacatctg
aagatgaaatgggaggaagagtttatagactggtggagcaaattctacgcttccactggg
gaaagagccatgtgtggatcttatctggagaagggctttgacactttaaaggtttataac
acagaactagaaaagacagaagattttgaggggctaactgacttttgtcaaacctttaaa
ctgtaccgaggcaaatctcaggatgacaatgaagacccatctgttgttggtgaattcaag
ggcatgtttaaaatctacccacttccagatgatccttccatgcccccaccatcccgccag
ttccgacagctgcctcccaatggccttgaagaatgtcttgtccgagtctacattgtgcag
gcaactggtctacaacccaaagatgctaatggaaagtgtgacccttatgtgaagatctct
ctgggcaagaagtcagtcagcaaccaggacaaatacataccctgcactctggatcctgtt
ttcggatgcatgtttgagttgtcctgtgtccttccactggagaaagatctcaaggtcata
ttgtatgattatgatcttctctccaaggatgaaaagattggggagactgtgatagacctg
gagaaccgcttcttgtccaagtatggtgctcgctgtggactgccactaacctactgcctg
tcgggagtgaaccaatggcgagatcagctaaaaccatctcagctcctgcaccgattttgt
gaaaggtggaacttcaagcttcctgtgtacaaggacgatcggataatattccgtggccat
gagttcacattggcagatctggaagattcaaagccctcaaatccccaccttggaccagca
tgtgaatgcttagcactgtatgttctacgtagacaggggctggttcctgagcatgtggag
acaagacctctgtacagcccactgcagccagacattgaacagggaaaacttcagctatgg
gtggacctgtttccaaagtcactgggcccgccaggacctcctttcaacataacgcctcgc
aaagcaaaacgacttttccttcgctgcatcatttggaacaccaatgacgttattctggat
gatgtcagcattactggagagaagatgagtgatatttatgtgaaaggctgggtattcggc
tatgaggagaacaagcagaagacagatgtccattaccgctctctgggaggagagggaaat
ttcaactggaggtttgtctttccctttgactaccttccagctgagcaagtctgcatcgtc
aataaaaaggaacacttttggagcttagacaaagcagaaacaaaaatatccccaaaactc
gtagtccaaatctgggacaatgacaagttctcatttgatgattatctgggttctatagaa
atggatctgaacaaaatggttcggccatcaaagactccagagaagtgcacgctgaccatg
ctggagcagttgcaggacccaaagaagcttgtttccctttttgaacagaagactatgaga
ggatggtggccttgtgttggagaggcgaatggagaaaaaataattgctggtaaagtggag
atgactctggagattgtcagtgagccagagcgggatgagaggccagcaggactgggaaga
gatgaaccaaacatgaatccacatttagaggagcccaagcgccctgagacatcatttctc
tggctgtcttctccattcaagacaatgaaatacatcctgtggcgcaggtttaaatgggtc
atcatcgggatcataatactctgcatcttgctgctcttcattggcgtattcttgtactct
ttcccgaattatgctgctatgaagttggtgtcacctttcagccgtgcacagtaa
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