Polypterus senegalus (gray bichir): 120527949
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Entry
120527949 CDS
T08668
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
psex04091
]
120527949 (atrn)
Lectins [BR:
psex04091
]
C-Type lectins
Others
120527949 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
EGF_LMN_ATRN
Kelch_3
Kelch_5
Kelch_4
CUB
Kelch_2
EGF_TEN
PSI
Kelch_6
EGF_Teneurin
NANM
PSI_integrin
EGF_laminin
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
120527949
NCBI-ProteinID:
XP_039607868
LinkDB
All DBs
Position
4:complement(214459133..214754205)
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AA seq
1367 aa
AA seq
DB search
MDSEERRALRVEGRSLGPGLGLQLLMRPRGVLVLLLAGLTALGHCKDCDKPCINGQCSTA
SGTCLCEPGWVGDQCQHCGGRFRLTGSSGFLTDGPGNYKYKTKCTWLIEGKVNTILRLRF
NHFATECSWDHLYVYDGDSIYAPLLAAFSGLIVPEKYANETIPEVVSKSGYALLHFFSDA
AYNLTGFNISYRINSCPNNCSDQGLCLLNDTTKEVFCQCKENWKGEACDIPYCIEDCGTP
DRGICANISKRCLCNSGWQGPDCSIPLPANQSFWTREEYPVQSLARASHKAVVNNNIMWV
IGGYVFNYSDYKMVKAYDLVSEEWLPLNQSVDSVIGRYGHSLALFKDKIYMYGGKIDSTG
NVTNQLWVFYIQNQSWVLVNPKAKEQYAVVGHSAHIIRLLDDSVVMLVIFGHCPLYGYIS
KVQEYNLATNEWSILTTQGALVQGGYGHSSVYDSKTRAIYIHGGYKAFSANKYGLADDLY
KYQVDTRMWTILKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDI
ACDEWSVLPRPDLHHDVNRFGHSAVYSNRIMYIFGGFNSLLLSDVLMFTPASCAAFLSNS
TCTQAGPGIRCLWNATLEKCLSWESASPEEEQQVISTCPAKAFADNEKCDQYTDCYSCTA
NTNGCQWCGDQCISMNSNCTAVPSPISEYEACRKDNPEYVCNKKTSCKSCAMDQNCQWEP
RNQECIALPENICGENWHLVGNSCLKFTTAKDNYDNAKLSCRNNNAALASLTTQKKVEFV
LKELQIMHVLYKATVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDAGFCGYLAE
PSQSGLKAATCVNSVNGSLCERPANHSAKQCRTPCALRATCSECTSGSSECMWCSNMKQC
VDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLDQPGCGWCTEPTNTGKGQCIE
GSYRGPVQMPIPSSFQEPALNTTMCPFDHKYNWSFIQCPACQCNGHSRCINESVCEKCED
LTTGKHCETCISGYYGDPTNGGTCQPCKCNGHASICNAQSGKCFCTTKGIKGDKCHLCEV
ENRYQGNPLKGTCYYTLLIDYQFTFSLSQDDDRYYTAINFVATPEEQNRDLDMFINASKN
FNLNITWATSFAAGTQAGEEVPIVSKNNIKEYKDSFSNEKFDFRNSPNITFYVYVSNFTW
PIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQ
MASRPFATINLALEMDEEPPDLIGGSIKSVPKPIALEPCFGNKAAVLSIFVRLPRGSGGI
PPPGQSGLAVASALVDVSQQMPIAYKDKSGVVRNRKHQPPAQPGTCI
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggactcggaagagcgacgtgccctccgagtggagggccggtctttggggccaggactg
gggctgcaactcttgatgaggccgcggggtgttttggtgctcctgctggcaggcctgacc
gctctcggacactgcaaggactgcgacaagccatgtatcaatggacagtgcagcactgct
agcggcacttgcctctgcgagccaggctgggtcggggaccagtgccaacactgcggggga
cgcttcaggctgactggatcctctggattcttaacagatgggcctggcaactacaagtac
aagactaagtgtacctggctgatagagggaaaagtcaacaccatcctcagattgcggttc
aatcattttgccaccgagtgtagctgggatcatctttatgtttatgatggtgattcaata
tatgcacccttactggctgcatttagtgggcttattgttcctgagaaatatgcaaatgag
actataccagaagtggtttccaagtcaggctatgcccttctgcacttcttcagtgatgca
gcctacaatttaacaggattcaacatctcctacaggattaattcttgtcccaataactgt
tcggatcaagggttgtgtttactgaatgacacgaccaaagaggtgttctgtcaatgtaaa
gaaaattggaaaggagaagcctgtgacatcccttactgcattgaggactgtggcacccca
gaccgaggcatatgtgccaacattagcaaacgctgcctttgcaatagtggatggcaaggt
cccgattgttccattcccttgcccgctaaccagtcattctggaccagagaggaatatcct
gttcagagcctagcacgagcctcacataaagcagtggtgaacaacaacatcatgtgggtg
attggtggttatgtgttcaattattcagactacaagatggttaaagcgtatgatcttgtt
tctgaagagtggctgcctctaaatcagtctgtagactctgtgattggcagatatggacac
tctttagcattattcaaggataaaatctatatgtatggtggtaagattgactccacaggg
aatgtgacaaaccagctgtgggtgttttatattcagaaccagtcctgggtgcttgtgaac
ccaaaggctaaggagcagtatgctgttgttgggcattctgcgcacattatcagactactt
gatgacagtgtggtcatgcttgtcatttttggtcactgtccactgtatggctatattagc
aaagtacaagagtataaccttgcaacaaatgagtggagcatcctcacaactcaaggagcc
cttgttcagggaggctatggtcacagcagtgtctatgactctaaaacccgggccatctac
atccatggcggctacaaggcattcagtgccaacaaatatggactggcagatgatctttat
aagtatcaggtggatacacgcatgtggacaattctcaaggacagtggcttcttccgttat
ttgcacactgcagtcattgttagtggaacaatgcttgtttttggaggaaacacgcataat
gatacttcaatgagccatggtgccaaatgtttttcttctgacttcatggcttatgatatt
gcttgtgatgagtggtcagtgctgcccagaccagatttacatcatgatgtgaaccgattt
ggacactctgcagtctacagcaacagaatcatgtatatatttgggggtttcaacagtctg
cttctcagtgatgttttgatgttcacaccagccagctgtgcagcctttctcagtaacagc
acctgcacccaagctggtccaggcatccgctgcctgtggaatgctactttggagaagtgt
ttgtcttgggagtctgccagcccagaggaggaacagcaagtcatctcaacgtgcccagct
aaagcatttgctgacaatgagaaatgtgatcagtatactgactgctacagctgcacagcg
aacacaaatggctgccagtggtgtggtgaccaatgcatttccatgaacagcaactgtact
gcagtaccgagtccaatttctgagtacgaggcatgccgcaaagataacccagagtatgtc
tgcaataagaagacaagctgtaagagctgcgccatggatcagaactgccagtgggagcca
cgaaaccaagagtgcattgcccttcctgaaaacatttgtggggagaattggcacctggtt
ggtaactcatgcttgaaatttacaacggccaaagacaactatgacaatgctaagctgtca
tgtcgcaacaacaatgctgcactggcatctctaacaacacagaagaaagtggaatttgtg
cttaaggagctacaaattatgcatgtcttgtataaagccacggtgactccttgggtaggc
ctacgcaaaatcaatgtgtcttactggtgctgggaggacatgtctccttttaccaacaca
tctctgcagtggttacctggagaacccagtgatgctggcttttgtggatacctagctgag
ccctcccagtcgggcttgaaagcagccacctgtgtcaattctgtcaatggcagcttatgt
gaacgtccagcaaatcacagtgccaaacagtgtcgcaccccttgtgccttgcgtgcgact
tgcagtgaatgtaccagtggaagttctgaatgcatgtggtgcagcaacatgaagcagtgt
gttgactcaaatgcctatgtggcctcctttccttttgggcagtgtatggagtggtacaca
atgaacagctgtccacctgaaaattgttcaggttaccgtacatgtggccagtgcttggat
cagcccggttgtgggtggtgcacagagcccaccaataccggtaaaggacagtgtatcgaa
ggctcgtaccgtggcccagtccagatgcccattcctagttccttccaggagcctgctctt
aataccaccatgtgtccatttgaccacaaatacaattggtctttcatccagtgtccagct
tgccaatgtaatggccacagcagatgtatcaatgaaagtgtctgtgagaagtgtgaagac
ctgaccacaggaaaacattgtgagacctgtatttcaggctactatggagatcctaccaat
ggaggcacatgccagccctgcaagtgcaatggccatgcatccatctgcaatgcacaaagt
gggaagtgcttctgtaccaccaaaggaattaaaggggacaagtgccacctttgtgaagtc
gaaaatcgataccaaggaaacccactaaagggaacttgctactataccctgctaattgat
tatcagttcacattcagtctatcccaagatgatgaccgttactatacagccattaacttt
gttgctactcctgaagaacaaaatcgggatctggacatgtttatcaatgcttccaaaaac
ttcaatcttaacatcacatgggcaaccagctttgcagctggcacacaagctggagaggag
gttccaattgtgtccaagaataacatcaaagaatataaggacagtttttctaatgaaaaa
tttgatttccgaaacagtcctaacattacattctatgtgtatgtcagtaacttcacctgg
cccattaagatacaaattgcattctcccagcacagcaatttcatggacctggtgcagttc
tttgtgacctttttcagctgcttcttgtcccttcttctggtagcagcagttgtgtggaaa
attaagcaaagctgttgggcatcacggcgaagagagcaacttctccgtgagatgcagcaa
atggctagccgtccctttgcaaccatcaacttggccttagagatggacgaagaacctcct
gaccttattggtggaagtataaagagtgtccccaagcctattgctctggagccatgcttt
ggaaacaaggctgcagttctttccatatttgtgaggttaccaagggggtctggcggtatt
cctccacctgggcagtcaggtctcgctgttgccagtgccttggtggacgtttctcaacaa
atgcctatagcatacaaagataaatctggagtggtaagaaatcgaaaacaccaaccaccg
gcacagccgggaacctgcatttga
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