Polypterus senegalus (gray bichir): 120528132
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Entry
120528132 CDS
T08668
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120528132
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120528132
Membrane trafficking [BR:
psex04131
]
Protein recycling
Others
Others
120528132
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120528132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
PDZ_2
DarA_N
SNX17-31_F2_FERM
USP7_C2
Motif
Other DBs
NCBI-GeneID:
120528132
NCBI-ProteinID:
XP_039608125
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Position
1:complement(81789639..81944435)
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AA seq
571 aa
AA seq
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MTAAGDGNVVVKMADEVGDGIRSGPPLPRNSSSTGSAGLPSPGVSSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGEKELLLTVLSVPQHEADSLDPGDDSSGQSFYDYTEKQAVPISIPTYKHV
EQNGEKFVVYNIYMAGRQLCSKRYREFSILHQNLKREFTNFTFPRLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTITVRVKN
STTDQVYQAVASKVGMDSITASYFALFEVINHSFVRKLAPNEFPHKIYIQNYTSAMPGTC
LAIRKWLFTTEEEVLLNDNDLAIAYCFHQAVDDVKKGYIKVGEKAYQLQKLAEQRKMGMY
LNIVRSCEGYNEITFPHCACDSRRKGHVITAISIKHFKLLACTEEGQLENQVIAFEWNEM
QRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEVTDK
DNKNCSKDEYLPAVEIKQKGWCHLGGEIATS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagctggcgacgggaatgttgttgtgaagatggcggatgaagtgggtgacgga
atccgctccgggccgccgctgccgagaaatagttcgagtaccggctcagccggtctccca
tctcctggggtcagttcagggcccagactagtacgcattgtcaaatcggattcggggtat
ggatttaacgttagaggccaggtgagcgaagggggtcagctccggagtatcaacggcgag
ctatacgcaccgctgcagcacgtcagtgccgtactgcccgggggagccgcagatcgagct
gggatctccaagggggaccgcattctggaagtgaatggtgtaaatgtggaaggtgcaacc
cataagcaagtagtggacttaatccgagctggagagaaagagctgctgctaactgtcctg
tcggtaccacaacacgaagctgatagtttagatcctggggatgattcatctggccagtcc
ttctacgactacactgagaaacaggctgtgcccatttctattcccacatacaagcatgtt
gagcaaaatggagaaaaatttgtggtatataacatatacatggcgggtcggcaattgtgt
tcaaagcggtaccgtgaattttctattctgcatcaaaacctgaagagagagtttaccaat
ttcaccttcccaaggttgccaggcaagtggcccttctccctttctgagcagcagttggat
gcacgtcgacgtggtctggaagaatacctggagaaagtttgttctgtacgggtgattgga
gagagtgacatcatgcaggagtttctttcagagtctgatgagaattataatggagtatca
gatgttgaacttcgaatagcactaccagataaaacaaccattacagtcagagtgaagaac
agcaccacagaccaggtctatcaggcagtcgcctctaaagtgggcatggacagcattact
gcaagttactttgcactgtttgaagttatcaatcactcctttgttcggaagctggctccc
aacgaatttcctcacaagatatacattcagaactacacctctgcgatgccaggaacatgt
cttgcaatcaggaaatggctattcactacagaggaggaagtgttgttaaatgacaatgac
ctcgctattgcatattgcttccatcaggcagtagatgatgtaaaaaaaggatacattaaa
gttggggagaaggcctaccagcttcagaaactggcagagcagagaaaaatgggaatgtat
ctgaatattgttcgttcttgtgaaggatacaatgaaattactttccctcactgtgcatgt
gactcaaggagaaaggggcacgtgatcaccgcaattagtattaagcactttaaactactt
gcctgcactgaagaaggacagttggagaaccaggtaattgcgtttgagtggaatgaaatg
cagaggtgggatacagatgaggagggcatggcattctgttttgagtacgcacgtggtgag
aagaaaccacgatgggtcaagatcttcactccatatttcaactacatgcacgagtgcttt
gagagagtattctgtgaactcaaatggcgaaaggaggtggaagaggaggtgactgacaag
gacaacaagaactgcagtaaagatgaatatcttcctgctgttgagatcaaacagaaggga
tggtgccacctaggaggagagatcgcaacatcataa
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