Polypterus senegalus (gray bichir): 120528713
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Entry
120528713 CDS
T08668
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120528713
03037 Cilium and associated proteins [BR:
psex03037
]
120528713
Transporters [BR:
psex02000
]
Other transporters
Pores ion channels [TC:
1
]
120528713
Cilium and associated proteins [BR:
psex03037
]
Other cilia and associated proteins
Stereociliary proteins
120528713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
RVT_1
Exo_endo_phos_2
COX16
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
120528713
NCBI-ProteinID:
XP_039608803
LinkDB
All DBs
Position
4:complement(59067100..59165974)
Genome browser
AA seq
1331 aa
AA seq
DB search
MPLTVSSYGSFESLVCQLAGSIPTIVATIYRPPKFNKEFLNDFSAFLAYLSSLSSNIIIM
SDFNIHLDNSKSLATRDFISCLDNFDFQPFMETPTHSKGHILDLICCTGLTPNDCTAEEF
PSSDHFLLTFNMSLTVYTIKPLHVIAFRNLKNINMDNFQLGRQLERLYKKTGLNVHKEMY
SSHMHHYRDSIRHAKAAYFTALISSNKENSGTLFSLLRSLTSPPDSLSLHCLSNEFCNTL
MTFFNDKIQAIHYNLGSAATDTTTDDFPPPTHSFSMFELPSTSEIMDLINSSKPSTCHLD
PIPTALVKACLPSLAPLVVSIIHSSLSTGIVHQSMKTAVLKKTVASQLHQHLSANSLYKP
FQSGFRCFHSTETALIKITNDLLVAADSGLITILVLLDLSAAFDTVCHFTLLKRLSALVS
IEVDNQDDVSSDGSEEDETDVDSDEEEEEEEVKPSKSTKNTTTVKRHIKDAEEDSHSVAK
KTGKRSKEESEHGRSKNKEDKLKVDTTKNKKNRRNEKTKNKSEEEEDEDEEEEQPKHKHK
GKHGKKKVKSGSSSSEEDEDVITEEELAKLKEAVEEKKKSITTLRNQPWRMKKKLETLKE
AQEFIEKFEGALGKGKGRKFYAYKVMMLKKWMKFKRDFENFKTACIPWEMKIKEIESHFG
SSVASYFIFLRWMYGINMVLFGLTFGLVMVPEALMGKPYGSMPRKTVPRSESSTAMDFAT
LWDFGGYAQYSVLFYGYYNNQRAIGWLKFRLPLSYFLVGVGTIAYSFMVVIRTMASNANQ
EGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVEEQENRKEENIHLTR
FLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCPT
LFDVISALENYHPRIALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEAVVKYNMTIW
EANLYNGTLSENSTRPPIEVDPADVPRGPCWETMVGQEFVRLTISDTMTTYITILIGDFL
RALFVRFINYCWCWDLEYGFPSYAEFDISGNVLGLIFNQGMIWMGAFYAPCLPAINVLRL
HASMYLQCWAVMCCNVPHERVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDCG
PFSGKNRMYDVIQETLENDFPAWFGKVFSYASNPGLILPFILLMVLGIYYLQSTSKAYKA
ANIELKKKLQNQNEENKRKNKTAALKAASELEEAKNLAAQARQESLAVQNGFQGQRSGNK
DFERNHLGQNGGNFYSPRERGVRPGNLHPPHIAVTSPPGRREPGMHGYLPGNPHHHGPRT
SQLHPQYRQGI
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgacagtttcttcctatggttcatttgagtctcttgtctgtcaactagctggc
tctattcccaccattgttgcaactatttaccgtccccctaaattcaacaaagagtttctg
aatgacttttctgcttttttagcttatttgtcctcgttatcttcgaacataataataatg
agtgattttaacattcatttggataacagtaagtccttggcgaccagagattttatctct
tgtcttgataactttgactttcagccgtttatggaaaccccaacacattccaaaggacat
atcttggatttaatctgctgtactggactcactccgaatgactgtactgcggaagaattt
ccctcttcagatcattttctccttacattcaatatgagtcttactgtctacaccatcaaa
cctcttcatgtaatagcttttaggaatcttaaaaatatcaacatggacaattttcaatta
ggtcggcaattagaacggctgtacaagaagacaggtcttaatgttcataaagaaatgtat
tccagccatatgcatcactacagggacagcatacggcatgctaaagctgcctattttact
gccttaatctcttccaataaggagaactctggaacacttttttccctgctcagatcgcta
acaagtcccccagactctctttccttgcactgcctttctaacgaattctgtaacacctta
atgacattttttaatgataaaatccaggcaatacattataatttaggctctgctgctact
gacaccaccactgatgattttcctcctcctactcattcattttccatgtttgagcttccc
tccacctcagaaatcatggatctcatcaatagctctaagccttcaacctgtcacctggat
ccaattcccactgcattggttaaagcctgccttccctcactagctcctctcgttgtttca
attattcactcgtcactttctaccggaattgttcaccagtctatgaaaactgcagttctt
aaaaaaactgtggcttcccaactacatcagcatttatctgctaacagtttatacaaacca
ttccagtcaggcttccgatgttttcacagcactgagacggcactaattaagattactaat
gatctcttagtggctgcagactcaggcctaatcacaatccttgttcttcttgacctcagt
gctgcatttgacactgtctgtcacttcaccttactaaaaaggttatctgcgctagtcagc
atagaagtcgacaatcaagatgacgtcagttcagatggcagtgaagaggatgaaacagat
gtggatagtgatgaagaggaagaagaagaagaagtaaaacccagtaagtctacaaaaaac
acaactacagtaaaaagacacataaaggatgctgaggaagactcacacagtgtggccaaa
aaaacaggtaaaaggagcaaagaagaaagtgaacatggaaggagtaaaaataaggaggat
aagctaaaagtagacactacaaaaaataaaaagaacagaagaaatgaaaaaacaaaaaac
aaatctgaagaggaggaagatgaagatgaagaggaagaacagcctaagcacaagcataaa
ggcaaacatgggaagaaaaaagttaagtcaggaagttcgtcgtcagaagaagacgaagat
gtaataactgaagaagaattggcaaagcttaaagaagcagttgaagagaaaaagaagtca
attacaaccttacgaaatcagccatggcgtatgaaaaagaaactggaaacactaaaagaa
gcccaggaatttatagagaaatttgaaggtgcccttggaaagggcaaaggaagaaagttt
tatgcatataaggtgatgatgctcaagaaatggatgaagtttaagcgggattttgaaaat
ttcaaaactgcctgtataccatgggaaatgaaaataaaggaaatagaaagtcattttggg
tcctctgtggcttcgtacttcatttttctgagatggatgtacgggattaacatggttttg
tttggtctcacttttggccttgtcatggttcctgaggcactgatgggaaaaccctatggc
agtatgccaagaaaaactgtaccaagaagtgaatcttcaacagctatggactttgcaact
ctgtgggattttggaggttatgcacaatactcagtgctgttttatggatactacaacaat
caacgtgccattgggtggcttaagtttcgtttaccactctcctattttttggttggagtt
ggaactattgcttatagcttcatggtggttatcagaacaatggcaagcaatgccaatcaa
gaaggtggtggggatgacactagctttaactttagttggaaaatgttcaccagctgggat
tatttaattgggaatccagaaaccgctgataacaagtttgcttcaattaccactagcttt
aaggaatcaatagtggaagagcaagaaaatcgtaaagaggaaaatattcacttgacacgg
ttcctgcgtgtgctggctaacttcttagtactttgctgtcttgctgggagtggataccta
atttattttgttgtgcgacgctctcaaaagtttgcactggaaggactagaaaactatggc
tggtgggagagaaatgaggtgaacatggtgatgtctttgttgggaatgttttgcccaact
ttatttgatgtgatcagtgctttggaaaattaccacccacgcattgcccttagatggcag
cttggacgaatatttgcattgttcttaggaaatctttatacttttattattgctcttatg
gatgaaataaacctgaagctggaagaagaagcagtagttaagtataatatgacaatctgg
gaggccaatctttataatggaactttgtcagaaaattccactagaccacctattgaagtt
gaccctgctgatgtgccaagggggccgtgctgggagacaatggttggacaggaatttgta
agactgaccatctctgacaccatgaccacctatataactatcctgattggagattttctt
cgagctttgtttgtcagatttattaactattgttggtgttgggatctggaatatggattt
ccatcttatgcagaatttgatatcagtggaaatgtgctgggtctgatctttaaccaagga
atgatatggatgggggcattttatgcaccttgccttccggccatcaatgtgctacgactc
catgcatccatgtatcttcagtgctgggcagtcatgtgctgcaacgttccacatgaaaga
gtatttaaggcctccagatctaataacttctacatggcaatgttgttgtttatccttttc
ctgtcgacgttacctgcagtttatacgattgtctccatcccgccttcatttgactgtggc
ccttttagtgggaaaaaccgaatgtatgatgttatccaagaaaccctagagaacgatttt
cctgcctggtttggaaaagtcttcagttatgcttcaaatcctggattaattcttcctttc
atattgctcatggttttaggaatatattacctgcagtctacttcaaaagcctataaagca
gctaatattgaattaaaaaagaaacttcaaaatcaaaatgaggaaaataaaaggaagaac
aaaactgcagctctgaaagcagccagcgagttagaagaagccaagaatcttgctgcccaa
gcaagacaggagagcttagcagtacaaaatggatttcaaggtcaaagatcaggcaacaaa
gactttgaaaggaaccatctaggacagaatggtggaaatttctattcccctagggagaga
ggtgtgcggcctgggaatcttcatcctccacatattgctgtgacttctcccccaggaaga
agagagcctggaatgcatggatatttgccaggaaatcctcaccaccatggaccaagaaca
tcacaacttcatcctcagtatagacagggaatctga
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