Polypterus senegalus (gray bichir): 120529397
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Entry
120529397 CDS
T08668
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120529397
Cell adhesion molecules [BR:
psex04515
]
Cadherins
Major cadherins
120529397
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Fibulin_C
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120529397
NCBI-ProteinID:
XP_039609090
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Position
5:100255292..100386582
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AA seq
794 aa
AA seq
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MTNNQSLKATFLMCTAILASVLHTTSKALTLQPNGELKGQVENVDRAMHHLRVKRGWVWN
QFFVLEEYTGLEPLYVGKLHSDMDRGDGSIRYILSGEGAGTMFTIDDNTGDIHAIQRLDR
EEKAQYVLRAQAVQRQTGMPLEPESEFIVKIQDINDNEPQFLDGPYRASVPEMSMTGTSV
LQLTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGIIRVSLPNMDREAKEHYELIIQA
KDMGGQMGGLAGTTTVNITLSDVNDNPPRFPQKLYQMSVPESAPVGSVVGRVRAKDLDVG
INAEMRYTIIDGDGRDTFDINTDPTNQVGIITIKKPLDFESKKSYTLKIEGANTHVDSRF
LNKGPFSDVTIVHISVEDVDEPPKFDSSSYYVEVAEDVEIGTVFQIVSAKDPDISNNSVR
YSIDRSSDRGKYFYIDLTSGALMPARPLDREEISWHNITVLAVEMTNPSQFGTVSVMVKV
LDVNDNPPELAKYYDAFVCENTKAGQLIQTVTAVDLDDPLAGQHFYYSLAPEAANNPNFT
LRDNQDNTAFILSRRGGFSQQEQSIYYLPILISDGDQPMQSSTSTLTIRVCSCDTDGNVM
SCTAEPYTLPVSLSRGALIAILACIFVLLVMILLILSLRNYKKKPYLTDEEENVHENIVR
YDDEGGGEEDTEAFDIAAMWNPREAQLSKIRQDMVPEIESLSRYVPQTCMGESNVHSYVL
AKLYEADTDLCAPPYDSLQTYAYEGEGSVADSLSSLQSVSTNNDHDYDYLSEWGPRFKKL
ADLYGVSEANDVLW
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaatcagtctttgaaagccacgtttctcatgtgtactgcaattctagcaagt
gtactgcacactactagcaaggccctcacattgcaaccgaatggagagctaaaaggtcaa
gtggaaaatgttgacagggcaatgcatcacttaagggtgaaaagaggctgggtctggaat
cagttctttgttctggaggagtataccggcttggagcctttgtatgttggcaagcttcat
tcggacatggatagaggtgatgggtctatcaggtacatcctttctggagaaggtgctggc
acaatgttcactattgatgacaacactggtgacattcatgcaattcagcggcttgacaga
gaggagaaagcccagtatgttctccgtgcacaggcagtgcagagacagactggcatgcca
ttggaacctgagtcagagtttattgttaaaattcaagacattaacgacaatgaaccccag
ttcctggatggaccttacagagcatctgtacctgaaatgtcaatgacaggaacctctgtt
ttacagctgaccgctactgatgctgatgacccaacgtatggaaacagtgccagggttgtc
tatagcattctgcagggtcagccttacttttctgtggagccaaaaacaggcatcatccga
gtgtctttgcccaacatggatcgggaagccaaagaacattatgaattgatcattcaagcc
aaagatatggggggccaaatgggaggtttggctggtaccacaactgtcaatatcaccctc
agtgacgtcaatgacaatcctcctagattcccacagaagctttaccagatgagtgttcca
gagtccgctccagttggctctgtagttggaagagtcagagccaaagacctggatgtggga
atcaatgctgagatgcggtacaccatcattgacggagatgggagagacacatttgacatt
aacacagaccctaccaatcaagttggaattattacaataaaaaagccacttgactttgaa
agcaaaaagagctacaccttaaaaatagaaggggccaatacacatgtggactcaagattt
ctgaacaagggtcctttcagtgatgtaaccattgtacatatcagtgtggaggatgttgat
gagcccccaaaatttgactccagctcctattatgtcgaggtggcagaagatgtggagatt
ggcacggtctttcagattgtatctgcaaaagaccctgatatatccaacaattcagttagg
tattctattgatagaagcagtgatcgtggaaagtatttttacatagatctcacatctgga
gcattgatgcctgctaggcccttggatcgtgaagaaatctcttggcacaacattacagtt
cttgctgtggaaatgaccaatccatcacaatttggaactgtgtctgttatggttaaagtc
cttgatgttaatgacaaccccccagaactggcaaagtactatgacgcatttgtttgtgag
aataccaaagctgggcagctgattcagacggttactgctgtggacttagatgaccctctt
gcaggccaacatttctattatagcctggcgcccgaggcagctaacaacccaaacttcacc
ctcagagacaatcaagacaacactgcatttatactgagcaggagaggagggttcagtcag
caggaacagagcatctactaccttcctatcctcatatcagatggagaccagcccatgcag
agcagcactagcaccctcaccatcagagtgtgtagttgcgatacagatgggaacgttatg
tcttgcacggcagaaccatacacgcttcctgttagcctgagtagaggagctctaattgcc
attcttgcctgcatttttgtgttacttgtgatgattctgcttatcctttcactgcggaat
tataagaagaaaccctacttaacagatgaagaggaaaatgtgcatgagaacattgtgcgc
tatgatgatgagggcgggggagaagaggacacagaagcctttgacattgctgccatgtgg
aaccccagggaagctcagctctctaagatcagacaggacatggtgcccgagattgaaagt
ctttcgcgctacgttccacagacctgcatgggagaaagtaatgttcacagctatgtactt
gccaaactctatgaggctgacacagacctctgtgctcccccttatgattcattacagacc
tatgcctatgaaggggaggggtctgtggcagattcccttagctctttgcagtcagtctct
acaaacaatgaccatgactacgactaccttagtgaatggggtccacgctttaaaaagttg
gctgatttgtatggtgtctcagaggcgaatgatgtactgtggtaa
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