Polypterus senegalus (gray bichir): 120529438
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Entry
120529438 CDS
T08668
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
psex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120529438 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
120529438 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120529438 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120529438 (gtf2h1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120529438 (gtf2h1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120529438 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
120529438
NCBI-ProteinID:
XP_039609168
LinkDB
All DBs
Position
1:91241321..91314509
Genome browser
AA seq
548 aa
AA seq
DB search
MTTSSEDVLLAIKRVRQKKQDGILFLMAERIAWTPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGETTNFHFTNESSALKDRDAVKDLLQQLLPKFKRKTNKELEEKNRMLQE
DPLLFQLYKDLVVSQVISAEEFWANRLSLNSVDSSLPNHKQEVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRISMGVQD
LFSECAKLDDKGLKTMVGQGVKNPLIDLTSLDDQTLDEGYGVSSAPSSSGCTKSVKETSN
TAIIKRFNLHSAMVLAAGLRKHEPQNEQNSETSSTDGNSRDSDFFQPPLKKVKLQEAIEY
QDLKQENGKKTIALTLKKSERYSHGPVPVQSQPYTTSQDIINSVNYIKHEMDNYTPHLNH
VLSSSAASSAITALSPGGLLMQGGAHQAINQMVPNDIQSELKHLYVAAGELLRHFWSCFP
VNSPFLEEKVVKMKSNLERFHSSKLRPFQEKVQRQYLSTNLTGHLEEMLQASYSKFHMWQ
SKRMIRKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcgtctgaggatgtcttactggctataaagcgagtgcgtcagaaaaagcag
gatggtatactctttttgatggcagaaagaatagcttggactcctgaaggcaaagatcgt
ttcactgtcagccacttgtatgcagatatccgttgtcagaaaataagtcctgatggtaaa
gctaagattcagctgcaattagttctgcatactggggaaacaacaaacttccacttcacg
aatgagagtagtgctttgaaggaccgtgatgctgtcaaagatctcctccagcagctatta
cccaaatttaaaagaaaaactaacaaggagctggaggaaaaaaacagaatgctccaagaa
gaccccttgttattccagttatataaagacctggtcgttagtcaagtcatcagtgctgag
gagttctgggccaaccgccttagtttaaattcagtggattcttctctgcccaatcacaag
caggaagttggaatttctgcagctttcctggctgatgttcggccacagacagatggttgc
aatggcctaagatacaatctgacctctgacataatagagtctatatttaggacgtaccca
gcagttaaacagaaatatgcagagaatgttcctcacaacatgacagaaaaagagttctgg
accaggttctttcagtcccattattttcacagagaccgaatcagcatgggtgttcaggat
ctgttttcagagtgtgccaagttagatgataaaggactgaagactatggttggacaggga
gttaaaaatccattaattgacctaacttccctggatgaccaaacactggatgagggttat
ggtgtgtcttctgcgccatcatcatcaggttgtactaagtcagttaaggagacaagcaac
acagctattattaaaagattcaacctgcacagtgccatggtgttggcagcaggcctgcgc
aaacatgaacctcaaaatgaacagaacagtgagactagtagcacagatggtaactccagg
gattctgacttcttccagcctccactgaaaaaggtcaagctgcaagaagctattgaatac
caggacctaaagcaggaaaatgggaagaagaccattgccctgactctgaagaaatctgaa
aggtattcacatggtcctgttccagtacaatcccagccatatacaactagccaggatatt
attaattctgtcaactatattaaacatgaaatggataattacaccccacatcttaatcat
gtactttccagtagtgctgctagctcagctatcactgccttgtccccaggagggttgctt
atgcagggaggagcacatcaagccataaatcaaatggtgccaaatgacatacagtcagag
cttaaacacctttatgttgctgcaggagaactgctcaggcatttctggtcttgctttccg
gtaaactctccatttctggaggagaaggttgtgaaaatgaaaagtaacctggaacggttt
cattctagcaagcttcgtccgttccaagagaaagtccagaggcagtacttgagcacaaat
ctgacaggtcacttagaagaaatgctacaagcttcatatagcaagttccacatgtggcaa
tcaaagagaatgatcagaaaaacatga
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