KEGG   Polypterus senegalus (gray bichir): 120529478
Entry
120529478         CDS       T08668                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04110  Cell cycle
psex04114  Oocyte meiosis
psex04120  Ubiquitin mediated proteolysis
psex04141  Protein processing in endoplasmic reticulum
psex04310  Wnt signaling pathway
psex04340  Hedgehog signaling pathway
psex04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120529478 (cul1b)
   04120 Ubiquitin mediated proteolysis
    120529478 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120529478 (cul1b)
   04350 TGF-beta signaling pathway
    120529478 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psex04121]
    120529478 (cul1b)
Ubiquitin system [BR:psex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     120529478 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 120529478
NCBI-ProteinID: XP_039609245
LinkDB
Position
5:121826697..121999925
AA seq 777 aa
MSSGRGQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGVPSSKPSKKTQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFESQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNTEDIYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANID
EVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgtcatctggccgaggtcagaatcctcatggactaaaacaaattggtcttgatcaaatc
tgggatgaccttcgtgcaggaatacagcaagtctatactcgacagagcatggcaaagtca
cgatatatggaactctacacccatgtttataactactgtaccagcgttcaccagtcaaac
caggctcgaggtgctggagtcccttcttcaaagccttccaagaaaacacagaccccagga
ggggcacagtttgttggactggaactttataaaaggctaaaagaatttcttaaaaactac
ttgacaaatctactgaaggatggagaagacctgatggatgaaagtgtgctcaagttctac
acgcaacaatgggaagattacaggttttcaagcaaagtattaaatggtatttgtgcctac
ctcaatcgacactgggttcgtcgggagtgtgatgaaggacgcaaaggaatttatgaaata
tattcacttgccttggtgacatggagggaatgcttatttcggccattaaacaagcaagtc
acaaatgctgttttgaaattaattgaaaaagaaaggaacggagaaactataaatacaaga
ttgattagtggtgttgtccagtcttatgttgaacttggtctaaatgaggatgatgctttt
gctaagggacctacattatctgtctacaaagaatattttgaatctcagttcttggcagac
acagagcggttttacacaagggaaagtactgagttcctgcagcaaaaccctgttacggaa
tatatgaaaaaagcagaggctcggttactagaagaacaacgaagagttcaggtttacctg
catgaaagcacgcaagacgagctggcacggaaatgtgaacaagtattgattgagaagcat
ctggaaatatttcacactgagtttcagaatttgctagatgcagataaaaatgaagatttg
ggccgaatgtacaatcttgtctccagaattacagatggattaggggaactgaagaaactt
cttgaaacacatattcacaaccagggactagctgctattgagaagtgtggtgaagctgcc
ctcaatgatcccaagatgtacgtacagaccattttggatgttcataaaaaatataatgcc
ctagtaatgtctgcttttaataatgatgctggctttgtagctgctcttgataaggcttgt
ggtagattcatcaacaataacgcagtaacaaaaatggctcagtcatcaagtaaatctcca
gagcttttagcaagatactgtgactctctcttgaaaaaaagttcgaagaatccagaagaa
gcagagttagaggacaccttaaatcaagtgatggttgtatttaagtatattgaagacaaa
gacgtctttcagaagttttatgccaagatgttagcaaaaagattagtgcatcagaacagt
gctagtgatgatgctgaggccagtatgatttccaagctaaagcaagcatgtggctttgaa
tatacttctaaacttcagcggatgttccaggatattggagtcagcaaagatttgaatgaa
cagtttaaaaagcatctgtccaattctgagccactagacttggatttcagcattcaggtt
ctaagctcaggatcttggccattccagcagtcatgtacattcgctttaccatctgagctt
gaaaggagttaccaaagattcactgccttttatgccagtagacacagtggacgcaaacta
acatggctttatcatctatctaaaggggagctggtcaccaattgctttaaaaataggtat
acactgcaggcatccacattccagatggcaatcctgttgcagtataacacagaagatatt
tacactgttcaacaactgacagacagcacacaaattaaaatagacatactggtacaagtt
ttacaaatcttgttgaagtccaaattactggttttggaagatgaaaatgcaaatattgac
gaggtggaatttaagcctgacactttaataaaacttttccttggatacaagaataaaaaa
ctacgggttaatatcaatgtgccaatgaaaacagagcaaaaacaggaacaggaaactact
cacaaaaatattgaagaggacaggaagctgctaattcaggctgcaattgtaagaataatg
aagatgagaaaagttttgaaacatcagcaacttcttgcagaggtacttaaccagctctcc
tctagatttaaacccagggttcctgttataaagaaatgcatcgacatactgatagagaag
gaatatttggaacgtgttgatggggaaaaagatacttacagctatttggcttaa

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