Polypterus senegalus (gray bichir): 120529488
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Entry
120529488 CDS
T08668
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120529488 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120529488 (prpf4bb)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120529488 (prpf4bb)
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
120529488 (prpf4bb)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120529488 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
120529488
NCBI-ProteinID:
XP_039609262
LinkDB
All DBs
Position
5:127506876..127662448
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AA seq
1058 aa
AA seq
DB search
MADVDMETDEKSLDGGRDQDQEPSNSVHGLVPVPGALSSVWTGCRCNDAESSEKSGNEEN
GDVSEEERIVSKHSKHKKKKHKHRSKHKKHKHSSEEEKDRKHKHKHKHKKHKRKDTLDSS
KTNSAPSKRPKLDDMAVLEDLEKQRAMIKAELDNELMGGKVQSGMGLILQGYNSGSEEEG
EIQERARNGERAPVQSLAPKSQASQLTKDTKFKRELTEAKSSSKRKSRSKSRDRTKHKSD
KKKSKSTGPDSNTKEKNKPRSRSKEKKRSKSPIKRSRSKERARKSKSPVTKRRSSSETAK
KSQSPLVNEVEKVKVKERKKSPPIVEIKPRERIRKSKSPLPAARRSKSKERRSRSKERKT
RRLETEKERDKKPAKSPSKDASSGKENRSPSKKRGYSPRVRSLSPKRRERASKRSRSPPS
AVITDRRSKQSRSPSRNRSPSRRARSRSAERRRRDLERSRPSPVRIRARDEVTIRRERSR
DTSPLPARRRPSRSPPRRRSRSPIRRSRSPRRRSRSPLRRRSVDRDRIRRSRSRQRRRSR
SRDRRRRRSRDKEDKFKGSLSEGMKVDQESSSDEVLEDYDVDEEDEEALIEQRRLQRQAI
VEKYKSVNEDSNVSVPSEPSSPQSSSRSRSPSPDDILERVAADVKEYERENVDTFEANVK
AKQNLIQVDKDGINIKKPLAPDMFTESDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWT
DAEGYYRVNIGEVLDKRYSVYGYTGQGVFSNVVRARDMARANQEVAVKIIRNNELMQKTG
LKELEFLKKLNDADPDDKFHCLRLYRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHI
KAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPY
LVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILFAGKTNNHMLKLAMDLKGKMP
NKMIRKGCFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTINPTKDLLADMIGCQRLPEDQ
RKKVIQLKDLLDQILMLDPAKRISINQALQHPFIQEKI
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggacatggagacggacgagaagagcttggatggtggtagagaccaagac
caagaaccctcaaattcagttcatggtctcgtgccagtcccaggagcattgagttcagtg
tggacaggatgcaggtgcaatgatgctgagagttcagagaaaagtgggaatgaggagaat
ggtgatgtatcagaagaagaaaggattgtgtctaagcatagtaaacataagaagaagaag
cataaacacaggagtaaacacaagaaacacaaacattcttctgaggaagaaaaagacaga
aagcataagcacaagcataaacataagaagcataagcgtaaagacactcttgattccagt
aaaacaaacagtgcaccatctaaaaggccaaaattggatgatatggctgttttggaggat
ctggagaaacagagagcaatgataaaagccgagctggacaacgaacttatgggaggcaaa
gtgcagtctggaatgggcctgatactgcaagggtataactccggatcagaggaagaaggt
gaaattcaggaaagggcacgtaatggtgaacgcgctcccgtgcagagtttagcacccaaa
agtcaggcctctcaattgacaaaggatacaaaatttaagcgggaacttacagaagcaaag
tcaagctctaagcggaaaagtaggagtaaatctagagataggacaaagcataaatctgat
aaaaagaaaagtaaaagcactggaccagatagtaacacaaaagaaaaaaacaaacctcga
agccgttcaaaggagaagaaacgttcaaagagtccaataaaaagaagcaggtctaaagag
cgagccagaaagtcaaaatctcctgtaactaaacgccgttcttcatcagaaactgcaaag
aaatctcagtctcccttagttaatgaagttgaaaaggtcaaggttaaggaacggaaaaaa
tcaccacctattgttgaaattaaacctagagagcgcattagaaagtctaagtctcctcta
ccagctgctcgtaggagtaaatctaaagaaagaagatcaagatcaaaggaaagaaaaaca
aggagattagagactgagaaagagagagacaaaaaaccagcaaaatctccttcaaaagat
gcttcctcaggaaaggagaatcgatctcctagtaagaaacgtggctacagtccacgggtg
cggagtttgagcccaaaaaggcgagaaagagcatcaaaacgcagcagatcacctccatct
gctgttataacagacaggaggtcaaaacagagtcgatctccttcacgaaatcgatcaccc
tctaggagagccaggagcagatcagctgaacgaaggcggagagatttggaaaggtcaagg
ccttcacctgtgagaattagggcacgtgatgaagtgaccataaggagagaaaggtcaaga
gataccagcccacttccagcacggaggcgacccagcagatcaccacccaggagacgctca
cgttcaccaataagacggagtcgatctcctcggagaaggagcaggtctcctttgaggcga
agatctgttgacagagacagaattagaagaagcagatctcgacagagacgaaggtcaagg
tccagagatcgtcgcagaagacgcagcagagacaaagaagataaatttaaggggagcctt
tctgaaggcatgaaagttgatcaggagtcatcttctgatgaagtattggaagactatgat
gtagacgaggaagatgaggaagctcttattgaacaaaggcggttgcagagacaagctatt
gtggaaaaatataagtcagtcaatgaagacagcaatgtgtctgtaccctctgagcctagc
agccctcagagcagttctcgtagtcgttcaccatctcctgatgatattttggaaagagta
gctgctgatgtgaaagagtatgaacgagagaatgtagatacatttgaagcaaatgtgaaa
gctaagcaaaaccttattcaagttgataaggatggcatcaatataaaaaaaccgctagcc
ccagatatgtttactgaatccgatgacatgtttgctgcatattttgatagtgctagactt
cgtgctgctggtattgggaaagattttaaggaaaaccctaacctccgggacaattggact
gatgcagaaggatattatcgtgtaaatattggggaagttttagacaaacgatatagtgtg
tacggctatactggtcaaggagttttcagtaatgtggtcagagccagagatatggctaga
gctaatcaggaggtggcagtcaagattatcaggaacaatgaactaatgcagaagactgga
ctgaaagagctagaatttctaaaaaaacttaatgatgctgatcctgatgacaagtttcac
tgtttacgactctataggcacttctaccacaagcagcatctttgcttggtgtttgagcca
ctcagcatgaatttgcgtgaagtattaaaaaaatatggcaaagatgttggtcttcatatt
aaagcagtgcgttcatacagtcagcagcttttcctagcattgaaacttctaaagcggtgt
aatatcttgcatgctgatattaaacctgataatattttggtcaatgaatctaaaactatt
cttaaactttgtgattttggctcagcttcacatgttgcagataatgatataacaccatat
cttgtcagtagattctacagagctcctgaaatcattataggaaagccctatgactatggg
atagatatgtggtctgttggttgtactctgtatgagctttatactggaaagatacttttt
gctggaaaaactaacaatcatatgttgaagcttgcaatggacctaaaggggaaaatgcca
aataagatgataagaaaaggctgctttaaagatcaacattttgaccagaatttgaatttt
ttgtacattgaagtggataaagtgacagaaagggagaaagtgacagtcatgagtaccatc
aatcctacaaaggacttattagctgatatgattggatgtcagcgcctgccagaggatcaa
cgcaaaaaagtcattcagctaaaagacttgctggaccagattttgatgcttgatccagcc
aaacgaataagcatcaatcaggcactacagcacccatttatccaggagaaaatataa
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