Polypterus senegalus (gray bichir): 120529547
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Entry
120529547 CDS
T08668
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120529547 (irf4a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120529547 (irf4a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
120529547
NCBI-ProteinID:
XP_039609366
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Position
5:complement(144422878..144444170)
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AA seq
448 aa
AA seq
DB search
MNLDSDLSMSVNCGNGKLRQWLIEQIDSGKYPGLVWENDEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYR
IIPEGAKKGAKQLGLEEQSIHMNPISYPVHPSFTSLQTQVPNYMVPHERNWREYVPEQPH
PEIPYSPCSYPTRNHPWQGGACENGYQITGSFYACPSSESQTQGLSLDPAMRSAEALALT
DCRIHICLYYREMMVKEMTTTSPDGCRISSCSSADDKLFLHSSMDLVLFPYPFPTSQRKG
MEKLPNHLERGVLLWMTPDGLYAKRLCQSRIYWEGPLAPYSDRPNKLEKEQICKLFDTQQ
FLSELQAYAHDGRLVPRFQIVLCFGDEFPDPQRQKKLITAHVEPLFAKQLFYFAQHNSSP
FIRGYELPEHIASPENYQRSIHHPSIQE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggacagtgacctcagcatgtcggtcaactgtggcaatggaaagctgaggcag
tggctcatcgagcaaattgacagcggcaaatacccgggactggtctgggagaatgatgag
aagagcattttcaggatcccatggaagcatgccgggaaacaagactacaatagggacgag
gacgccgcgctctttaaggcatgggcgcttttcaaagggaagtacagagagggcattgat
aaaccagatcctccaacatggaaaacaagattaagatgtgccttgaataaaagtaacgat
tttgaggagctggttgagagaagtcagctggatatttctgatccttacaaagtttacagg
attataccagaaggtgcaaagaaaggagcaaagcagcttggtttggaagagcagtccatc
cacatgaaccccatcagctaccctgtccacccctccttcacttctctccagactcaggtg
cccaattacatggttccacatgaacgcaactggagagagtatgtcccagagcagccacat
ccagaaattccttacagtccgtgctcatacccaacacgaaatcatccttggcaaggaggg
gcatgcgaaaatggatatcagatcacaggatccttttatgcctgtccatcaagcgagtct
caaacacaggggctgtcattggaccctgccatgagatctgcggaagctctcgcacttaca
gactgtcgtatacacatttgtttgtactacagagagatgatggtcaaagagatgacaaca
acaagtcccgatggctgcagaatatcctcgtgctcaagtgccgatgacaaactctttctg
catagctctatggaccttgtgctttttccctacccttttccaacttcccaaagaaaaggg
atggagaagctcccaaaccacctggaaagaggggtattgttatggatgacccctgatgga
ctgtatgccaagagactctgtcagagtcgtatttattgggaaggacctcttgcaccctac
agtgaccgacctaataagcttgaaaaagaacagatctgcaagctgtttgacacccaacag
tttctgagtgaacttcaggcctatgcacatgatggacgtttggttcctcgcttccagatt
gtgttgtgcttcggagatgaattccctgacccacaaagacagaagaagcttatcacagca
catgtagagcccctttttgccaagcagttgttttatttcgctcagcacaacagcagtcct
tttattcgaggatatgaattacccgaacacattgctagccccgagaactaccaaagatcc
attcaccatccttcgattcaggaatga
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