Polypterus senegalus (gray bichir): 120529617
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Entry
120529617 CDS
T08668
Symbol
pard3aa
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
psex04517
IgSF CAM signaling
psex04520
Adherens junction
psex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120529617 (pard3aa)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120529617 (pard3aa)
09144 Cellular community - eukaryotes
04520 Adherens junction
120529617 (pard3aa)
04530 Tight junction
120529617 (pard3aa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120529617 (pard3aa)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120529617 (pard3aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120529617
NCBI-ProteinID:
XP_039609497
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Position
5:162828573..163728725
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AA seq
1382 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHNLIQQAVMRYKKAIAKGPGYWLHVHRLEHSEGGILD
IDDVLCDVVDDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDMFGSELSSAFQPYQVASE
IEVTPSALRASMPLHVRRSSDPALIGLSASFTESTLPAEEPSRKNPTRWSTTAGFLKPNT
QGCTHSLERKRGGMDSYRSLPRDAGNWSNQFQRENARSSLSANHPMVDKWLERQEQEEEG
VEAENGRIDPVGRADSCLEHNSTLSLDDMLKLVEVSNSGGPLGIHVVPFSARGGRTLGLL
VKRLEKGGKAEQENLFHENDCIVRINNKDLRNTRFEQAQHLFRQAMRTPIIWFHVVPAAK
KEKYEVLSQSEKNIPSYHGRFSPDSQESERGSAGSGLDHTPQKISRPGSQQDQTDSYSHH
PHNSSPSGKPPPGMPPSPHRVIGSTAADRGYNLKRIGRKLNIQLKKGPEGLGFSITSRDV
PVGGSAPIFVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGKTQEEAVALLRGTKMGGTV
NLIILRQEEAFLPRELTSEPDQMQNPRESSRLTGRKMVLPAEAPWPNEKTEEDDLVLTPD
GTREFLTFDIPLNDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAAFKDGRLRVNDQ
LIAVNGESLLGKANQDAMETLRKSMSVESNKRGMIQLIVARRITKRNELDAPGSPPGPDL
AMDTSLDDRERRISHSLYSGIDDPLPQRTTMPGRMMGNYQLSPTVNMPQDDTVIIEDDRP
PVLPARLSDQSSSSSHDDMGFATDGTGSWAKDIQEQNECTLSPDVDPDNTFQREGFGRQS
MSEKRTRQYADANQLDFIKTRKSKSMDLVADEINLSPRSEKSKGSPTRDVGPSLGLKKSS
SLESLQTAVAEVTLNGDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPAAEEEDEGMETL
EEDTEESSRSGRESVSTASDVATLSGPASIDKQMNGSRVKDDKRKEKDKAGKEKKKQERD
KEKDKNKTKKGGMLKGLGDMFRFGKYRKDERFVDKVERKGSSKAKNEETLTSEEDRIRMK
LEQERIQAKTREIRERQARERDYAEIQDINRTFGSDDDPTYAGIGSFESSLDSGQSMSVH
SRLPSTQEDNQPVEAVYAQVNKPRNGRPTSTDSSRLAPSNHDRIQRLRQEFQQAKQDDDV
EERRRTYSFEQPWPNSNTYAQTGRHSVSVEVQLQRQRQEERDSFQQAQRQYSSLPRQSRK
NASSISQDSWEKNYTPGEGFQSAKENPRYSSYQGSRNGYLGGSGGFNARVMLETQELLRQ
EQRRKEQQAKMKPSQEVPNNFDSYSSSTSPKGPYRQDVPPSPSQVARLNRLQTPEKGRPF
YS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgtttcggtaggacccgggtggtggtgccctgcggtgacggcaat
atcaaagtacacaaccttatccaacaggccgtcatgagatacaagaaagccattgctaag
ggtcctggctactggctgcatgttcatcgtctggaacacagtgaaggaggcatcctagac
attgatgacgttttatgtgatgtggtggatgataaagataggcttgtggctgtatatgat
gagcaagatccacatcatggcggcgatggcacaagcgccagctccacaggcactcagagc
cccgacatgtttggaagtgagcttagctcagctttccagccttatcaggttgccagtgag
attgaggtcacaccatcagctcttagagccagtatgccactccatgtacgtcgcagcagt
gatccagcacttattggtttgtcagcctctttcactgaatctacacttcctgctgaagag
ccttctcgaaaaaatcctacacgctggtctacgactgctggctttctcaagccaaacaca
caaggctgcacacatagtttggaaaggaagagaggaggcatggattcttatagaagcttg
ccacgagatgctggaaattggtctaatcagtttcagagggaaaatgcccgctcctcactg
agtgccaatcacccaatggtggataaatggttggaaagacaagaacaggaggaagaggga
gtggaggcagagaatggtcggattgatcctgtaggccgtgcagattcctgcttggaacac
aactccacactgtctcttgatgatatgctaaagctggtggaagtctccaacagtggtggg
cctctgggaatccatgttgtacctttcagtgcccgaggtggaaggaccctggggttatta
gtgaaacggctggagaaaggcggcaaggctgaacaggagaatctgtttcatgagaacgat
tgtatcgtgcggattaataacaaagacctgcgcaacaccagatttgaacaagctcagcat
ttatttcgccaggcaatgcgaacacccatcatttggttccatgtggttccagctgcaaaa
aaggaaaaatatgaagtcctttcccaaagtgagaagaacataccatcttaccatggtcgt
ttcagtccagactctcaggaaagtgaaagaggcagtgcaggtagtggcttagaccacaca
ccacagaagatatcccggcctgggagtcagcaggatcaaaccgattcctattctcatcat
ccccataacagcagcccttctggaaaacccccgccaggcatgccaccatcaccacataga
gtgattggctccacagcagcagatcgagggtacaatctgaagaggattggtagaaagctc
aacattcagctgaaaaaaggtccagagggattgggtttcagtatcacatctcgtgatgtt
ccagttggtgggtctgcaccaatttttgtaaaaaatattcttcccagaggagctgcaatt
caagatggtcgactgaaagcaggggacaggcttttagaggtaaatggtgttgacctgaat
ggtaaaacacaggaggaagctgttgctctattaagaggtacaaagatgggaggaactgtc
aatttgataattcttcgacaggaggaagcatttttaccacgggaattgacttcagaacca
gatcagatgcaaaaccccagagaatcatcgagactgacagggaggaaaatggtgttacct
gcagaggcaccctggccaaatgagaagactgaagaagatgatcttgttctcacaccagac
ggaaccagagaatttttaacatttgacattcccttgaatgattcgggatctgctggcctt
ggagtgagtgttaaaggcaacagatcgaaagagaatcatgccgacttgggaatctttgtc
aagtcaataatcaatggaggagcagcatttaaggacggtcgacttcgagtgaatgaccag
cttatagctgtgaacggggaatcattgctggggaaagccaatcaagatgccatggaaaca
ctgcggaagtctatgtcagttgaaagcaacaagcgagggatgatccagctcattgttgcc
aggagaataacaaagcgaaatgagctcgatgcacctggaagcccccctggtccagatctt
gccatggacacctcgttagatgatagagagcgcagaatttcgcattctttatacagtggg
attgatgatcctctcccacagaggactaccatgccaggaagaatgatgggtaattaccag
ctgtctcccacagtgaacatgcctcaggatgacactgtcattattgaagatgacagaccg
cctgtccttccagctcgcctctcagaccagtcatcttccagctctcatgatgacatgggc
tttgccacagatgggacaggctcttgggccaaagatatacaagagcagaatgaatgcaca
ctaagccctgatgttgacccagacaataccttccagagagagggatttggacgtcagagc
atgtcggagaagaggaccaggcagtatgcagatgccaatcaactggacttcattaaaaca
aggaaatcaaaaagcatggatttagtagctgatgagattaacctcagtcctcgatctgag
aagagcaaaggttccccaaccagagatgttggtccatctcttggcctaaagaaatcaagt
tctctcgaaagcttacagacagccgttgctgaggtcactttgaatggtgatatcccattt
catcggccgcggcctcgtataatcagaggaaggggctgcaatgaaagtttccgagcagca
atcgacaagtcttatgataagccagctgctgaggaagaggatgaaggcatggagacattg
gaagaggacacagaagaaagctcaagatcaggaagagagtctgtttctacggccagtgac
gtggccaccctcagtgggcctgcatccattgacaaacagatgaatggcagtcgagtcaaa
gatgataagagaaaagaaaaagacaaagctggaaaagaaaagaagaaacaagaaagagac
aaagaaaaggacaagaataagacaaagaaaggaggaatgctcaaaggtcttggggacatg
ttcaggtttggtaaataccgcaaagatgagagatttgtagacaaggtggaacgaaaagga
tccagtaaggcaaagaatgaagagactctaacttctgaggaggacaggattcgaatgaag
ttggaacaggaacgcatccaagcgaaaacaagagaaatccgagagagacaagcccgggag
cgagattatgccgaaatccaggacatcaatagaacctttgggtcagatgatgacccaaca
tatgctggcattgggtcttttgaatcctcgctggacagcggccaaagcatgtctgtacat
agtcggctgccgagcacccaagaagacaaccagccagtggaagccgtgtatgcacaagta
aacaaacctcgaaatgggcgtcctacttctactgacagcagcaggcttgctcccagcaac
cacgaccggatacagcggttgcgtcaggagttccagcaagccaagcaggatgatgatgtg
gaagaacgcagacgcacctacagttttgagcagccatggcccaactccaacacatatgct
caaactggccgtcattcagtgtctgtagaagttcagttgcaaagacaacgacaagaggaa
cgtgacagctttcagcaagcccagcgccagtacagctctttgccacggcaaagtagaaag
aatgcaagttcaatttcacaagactcctgggaaaaaaactacactcctggagagggcttt
caaagtgccaaggagaatccccgctactccagctatcagggctctcgaaatggctatctg
ggtggcagtggtggcttcaatgctcgagtcatgcttgaaacccaggagcttctgagacaa
gaacagcggcgcaaggagcagcaggcaaaaatgaagccgtcccaggaggtgcccaataac
tttgactcttattccagcagtacgtcacccaaaggtccatacaggcaagatgttcctcca
tctccatctcaggtagccagactcaatagactacagactccagagaagggtcgccctttt
tactcgtga
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