Polypterus senegalus (gray bichir): 120529621
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Entry
120529621 CDS
T08668
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03271
Virion - Rotavirus
psex04145
Phagosome
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
psex04514
Cell adhesion molecules
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
120529621 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120529621 (itgb1a)
04514 Cell adhesion molecules
120529621 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120529621 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120529621 (itgb1a)
04530 Tight junction
120529621 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120529621 (itgb1a)
04810 Regulation of actin cytoskeleton
120529621 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120529621 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120529621 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120529621 (itgb1a)
04515 Cell adhesion molecules [BR:
psex04515
]
120529621 (itgb1a)
04090 CD molecules [BR:
psex04090
]
120529621 (itgb1a)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120529621 (itgb1a)
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120529621 (itgb1a)
Cell adhesion molecules [BR:
psex04515
]
Integrins
Integrin beta subunits
120529621 (itgb1a)
CD molecules [BR:
psex04090
]
Proteins
120529621 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
120529621
NCBI-ProteinID:
XP_039609504
LinkDB
All DBs
Position
5:165273204..165364268
Genome browser
AA seq
802 aa
AA seq
DB search
MNVPFPILVTLGCLVCSIGAQQEGNECTKSNAKSCGECIQVAANCGWCTKPDFLKQGEPT
SARCDDLESLRKRCPDDMIENPRGTQKVLQNKPVTNRSQNSEKLKPEEITQIQPQKMTLT
LRSGEPQSFELKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTSLREEMSLITSDFRI
GFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLSLTSDGNQFNTLVGKQQIS
GNLDSPEGGFDAIMQVAVCSDIIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCH
LKDGMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSA
NSSNVIKLIIDAYNSLSSEVILENGKLPEGMTINYVSYCKNGVIGTGENGRKCSNISIGD
EVMFNISITAQKCPKKGQSETIRIKPQGFNEEVEITVNFICECECHNQGIPNSPICNNGN
GTFECGACRCNEGRIGRVCECSTEEVNSDDLDANCRKDNSTDICSTNGDCICGECVCKKR
ENPNEIFSGKYCECDNFNCDRSNNKICGGHGDCECRVCKCYPNYTGSACDCSLDTSTCLA
KNGQICNGRGICECGTCKCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFETGEKRETC
PTECMYFNLTKVSNRDKLPQPGQASALTHCKERDARDCWFYFTYAVNNSESDIHVHVVEK
PECPSGPDIVPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPNYGRKAAAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttccttttccgatattagtgacacttggatgcctggtttgttccattggtgct
cagcaagagggcaatgagtgtacaaaatccaatgcaaaatcctgtggtgagtgtatacaa
gtggcagcaaactgtggatggtgtaccaagcctgacttcttaaaacaaggggaacctaca
tcggcacgatgtgatgacttggaatctttgagaaaacgctgtcctgacgacatgatagag
aaccctcgtggaacacaaaaagtgttgcagaacaagccagtgaccaaccgcagccagaat
tctgaaaaattaaagccagaagaaattacccagattcagccacagaaaatgactctgacg
cttcgatcaggtgaaccacagtcttttgagctgaagttcaaaagagcagaagattaccct
attgatctgtattatcttatggacctctcattttctatgaaagatgatttagaaaatgtg
aaaaacttaggaacaagcctgagggaagaaatgtctctcattacctcagattttagaatt
ggttttggctcttttgttgagaaaactgtgatgccctatattagcaccactccagcaaag
ctcttgaatccttgtactggggatcagaactgcaccagtccctttagttataagaatgta
ctaagtcttaccagtgatggaaaccagtttaacacactggtcggtaagcagcagatttct
ggaaacctggattcacctgaagggggttttgatgcaatcatgcaggtggcagtgtgcagt
gacattattggttggagaaatgtcacacgactcttggtgttctctacggatgctggtttc
cacttcgctggggatgggaaactaggtgggatagtcttgccaaatgatggaaagtgtcac
ctgaaagatggcatgtacaccatgagccattattatgattacccttccattgcacatctt
gtgcaaaaattaagtgagaataacattcaaacaatttttgctgtcactgaggaattccag
cctgtttacaaggaactaaagaatctcataccaaagtctgctgtgggaaccctttctgcg
aactccagcaatgttatcaaattgattatcgatgcttataactcactatcttcagaagtt
atcctagagaatggcaaattacccgagggcatgactattaactatgtttcttactgcaaa
aatggagtcattgggacaggagaaaatggaagaaaatgctctaacatttcaattggcgat
gaggtgatgtttaatatcagcattacagcacagaaatgtcctaagaagggtcagagtgaa
accattcgaattaagccacagggcttcaatgaagaagttgagatcactgttaatttcatc
tgtgaatgtgaatgtcataatcaaggaattcccaacagccctatctgtaataatggcaat
ggtacatttgagtgtggggcatgcaggtgcaacgaaggacgtattggtagagtatgcgag
tgtagcacagaagaggtgaacagtgatgacttggatgccaactgtagaaaggacaacagc
acagatatctgcagtaccaatggagactgtatctgtggagaatgtgtttgtaaaaaaagg
gaaaatccaaatgagatcttcagtgggaaatactgtgaatgtgacaactttaattgtgac
aggtcaaataataaaatatgtggagggcatggtgactgcgagtgcagggtgtgcaaatgt
tatcctaactatacaggcagtgcctgtgactgctcattggacacatctacatgtttagca
aagaatggacaaatctgtaatggccggggaatttgtgaatgtggcacctgcaaatgtact
gatcccaaatttcagggcccaacatgtgagatatgccctacctgtccaggagtgtgcact
gagcacaaggaatgtgtgcagtgtcgggcatttgaaactggagagaagagagaaacatgt
ccaacagaatgcatgtacttcaacctgacaaaagtgagcaacagagacaagctgcctcag
ccaggccaggcatctgccctaactcactgcaaagaacgagatgctcgagactgctggttc
tactttacctatgccgttaacaattctgaaagtgacattcatgttcatgtagtggaaaaa
ccagagtgcccctctggtcctgacatagttcccattgtggctggtgtggttgctggcatt
gtactgattggccttgctctcctgcttatttggaaacttctcatgatcatccatgacaga
agagagtttgccaagttcgaaaaggaaaagatgaatgccaagtgggatactcaagagaat
ccaatatacaagagcccaattaataagttccagaatccaaactatggacgcaaagctgct
gctctctga
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integrated database retrieval system
