Polypterus senegalus (gray bichir): 120529637
Help
Entry
120529637 CDS
T08668
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120529637 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120529637 (ube3c)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120529637 (ube3c)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
HECT type E3
120529637 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
120529637
NCBI-ProteinID:
XP_039609550
LinkDB
All DBs
Position
5:complement(169338517..169577145)
Genome browser
AA seq
1083 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERKKREDERRRLKNAIIIQSYIRGYK
DRKQQYAIQRSEFDHFVRLAQSGGGGFSISDGANLSLLVRQLLFFYRQSEDSARLVWMCQ
NLVKSNIQFVKQLTGPDKQICLFQIKRMLGLCCRLLETCKDDKFNVAVPMRMLETFSSEK
TYLTVLQDANCVASLAEQILHYMVHNGLYRALYILVNHKLPSCLEFSEAPRVPFAGTLLE
HILKPLHFKYFSCPQGARQYIFATFTEEFIAAPYTEQIFHFFIPALADIQSSFPFEPFLE
AVLGMVSVWNVANIKAPWLFYFVLAVGETHLGSLSEEGLLLYLRTLQTLLPQLPVSVTST
SKQEVLSDSEDEDDTGIKTVLPNDDSTISVHVITEECIHKLDTKQQTNALLNLVWRDSAS
EEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPL
LQVISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISIHDNEFFGYAVEGQGQSSMMPFTLG
ELVTLSRCLRDACLGIIKLAYPETKPEHREEYIAAFKSVGVKTNTEMQQRIQAEQKRWIQ
LFKVITNLVKMLKARDIRRHFCPSEHWLSEEVNIRADKVTQLYVPSARHVWRSRRMGRIG
PLQSTLDVGIEPPQLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFL
DGINITIRRNYIYEDAYEKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNEL
LKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENMLVELPFA
SFFLSKLLGTSADVDIHHLASLDPEMYKNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVV
ELKPGGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEL
QVLISGAHVPICLEDLKRFTNYSGGYSANHPVIKIFWDVVESFTDEEKRKLLKFVTSCSR
PPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFCDAHLMRSKLLYAIESSAGF
ELS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttgaaggagactttaaaactcgacctaaagtttcccttggaggtgcaagt
cggaaggaagaaaaagcttcacttctgcatcggacacaagaggaacgaaaaaagagggag
gatgaaagacgaaggctaaaaaatgcaataatcattcagtcatatatacgaggatacaag
gatagaaaacagcaatatgccatccaaagaagcgaatttgatcattttgtgcgcttagca
cagtcaggaggaggaggattttccatcagtgatggagctaatttgagtcttttagtacga
caacttctgtttttttacagacaaagtgaagattcagctagattggtatggatgtgtcag
aatttggtaaagtcaaacatccagtttgtaaaacagctaacaggtcctgataaacaaata
tgtttgtttcagataaagaggatgctaggcttatgttgcaggcttctggaaacatgcaaa
gacgacaagtttaatgtggcagttcctatgagaatgttagagacattttcttcagaaaaa
acatatttgactgttcttcaggatgctaattgtgtagcctctttagctgaacaaattttg
cactatatggtacataatggactctacagagcgctttacattttagtaaatcacaagctt
ccatcttgtctagagttcagtgaagctcctcgtgttccctttgctggcactcttttggag
catatccttaaaccattgcactttaaatacttctcctgtcctcagggtgcaaggcaatat
atttttgcaaccttcacagaggagttcattgctgctccatatacagagcagatattccac
tttttcattccagcactggctgatatacagtcttctttcccttttgagcctttccttgaa
gcagttttagggatggtgagtgtctggaatgtggctaacatcaaggcaccttggctattt
tattttgttctggctgttggagaaacacatctaggtagcctctcagaagaaggtttacta
ctatatttgagaacactacaaactctgttgccacaattgccagtgtctgtgaccagcacc
agcaaacaagaagttctcagtgactcagaagatgaagacgacactggaatcaaaacagtg
ctaccaaatgatgactcaacaatttcagtgcatgttataaccgaagagtgtattcacaaa
ctggacacaaaacagcaaacaaatgcacttttaaacctggtttggagggattctgctagt
gaggaagtgttcaccatgatggcatctatctgtcacactctgatggtacagcatcgcatg
atggttcctaaagtcaggctcttgtacagcttggcattcaatgcaagattcctaagacat
ctttggcatttaataacttcaatgacaacaaaaatgattacaggatccatggtcccactt
cttcaggtgatatcacgaggttccccaatgtcactagaagattccaataggatcatacct
ttgttctatctcttcagctcccttttcagtcattcgctgatttcaatacatgacaatgag
ttctttggatatgctgtggaaggtcaaggtcagtcatcaatgatgcccttcacattggga
gagttggtaacactttctcgttgtcttcgagatgcatgtttgggaatcatcaagctggct
tatccagaaacaaaaccagagcacagagaagaatacattgctgcattcaagagtgttggt
gttaaaacaaacactgagatgcagcaaaggatacaagcagaacagaaacgttggattcaa
cttttcaaggtcataaccaacctggtaaaaatgctgaaggcacgtgatataagaaggcat
ttctgtccttctgagcactggctgtctgaagaggttaatataagagctgataaggttaca
cagctttatgttccatcagctagacatgtgtggagaagccgcagaatgggaagaattgga
cctttacaatctactcttgatgtgggaatagagccacctcagttgtctgtctcagaggaa
cgccagcttgcgattctaactgagctaccatttgtagtaccatttgaagaaagagtaaag
atcttccaaagattaatttatgctgacaaacgtgatgttcaaggtgacggtccttttttg
gatggaattaacattacaatccgtcgtaattatatttatgaagatgcatatgaaaaactt
tctcctgaaaatgaacctgacctgaagaaaagaatacgagttcaccttttgaatgctcat
gggcttgatgaagctggtattgatggtggaggcatattccgagagtttcttaatgaactt
ctcaaatcaggatttaatcctaaccaaggattttttaagaccacaaatgaaggacttctg
taccctagtcctaccgcacagatgttggttggtgattcttttgccagacactactacttt
ttgggaagaatattgggaaaggcactgtatgaaaatatgttggtagagcttccatttgcc
agtttcttcctctccaaattgctaggaacaagtgcagatgttgacattcatcacttggct
tctttagatccagaaatgtataaaaatctccttttcctgaagagctatgaagaagatgta
gaggaacttgggcttaactttactgtggttaataatgaccttggggaggcacaggttgtg
gagctaaaaccaggtggaaaggatattccagtaactactgcaaatagaatagcatatatt
caccttgtcgcagactacagactaaataaacagataagaccccactgccttgcttttcga
cagggtcttgcaaatgtggtaaacctagagtggctccgaatgtttgatcagcaggagctg
caggtattgatttcaggtgctcatgtacccatttgccttgaagatctcaaaagatttaca
aattattcaggtggttattctgcaaatcaccctgttattaaaatcttttgggatgtcgtg
gaaagttttaccgatgaagaaaaacgcaagctgctcaagtttgttacgagctgctcaagg
cctcctctacttggttttaaggaactataccctgccttttgtattcacaatggaggaagt
gatctggaacgtttacccactgccagcacatgtatgaacttgcttaagcttcctgaattt
tgtgatgctcatttaatgagaagcaaactcctttatgcgattgaatcttcagctggattt
gagttgagctga
DBGET
integrated database retrieval system
