Polypterus senegalus (gray bichir): 120529667
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Entry
120529667 CDS
T08668
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120529667 (mindy4)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120529667 (mindy4)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
120529667 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
HTH_61
Motif
Other DBs
NCBI-GeneID:
120529667
NCBI-ProteinID:
XP_039609605
LinkDB
All DBs
Position
5:179569498..179635577
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AA seq
735 aa
AA seq
DB search
MDNGNAVVEEVAASLVREYLSRKGLKKTIMCMDEELPRTDLSINNRNELRKILHLDSLYK
KNKVQKVQLKAMLEIIVKHLMETTQQTISTAETDLFFIQQKTKVKSKPVGALSVQLSDVA
DDETGGSTAVSEQSKTDFGRSADDKTHISYTKAPFKTSPVYNKAAILEAGSSEPSSESER
ENLPKFMSSANDNEGVRSVFSTGEVKNAFAELQKQRSTRPLRGMMAGPISSSQDDCSKKR
IFRRYSASNLATPLKDEDVHNRQLHFQPANTAAVNNLFPHETDIQLQSTQDKKTDSASKT
LLASQKVVQKLDFKEDTLKLRNEVKSLFKEMPSIRRKDSSENFEPDHVQLKAMEIDDIEE
DERFEGGKPHVFSSVKKINVDASPIDLNLAIELKKLLFGSSNACFNEEWKIQSFVFSELP
DLRYGIVQKKGGSCGILASVQACVLQKLLFEDGSSDSRTHKLKPLKTQLSKCLALAIAEI
LWRAGEKKKAVVALSSGRKHFIPAGRYKTDGILETVILNTVNTLEDLTLFLEQNIQQFEL
GPYGCILLTLSAIFSRSMDLIRKDFDVPSNTLIGAHGYCTQELVNLLLTGKAVSNVFNDE
IQLDSGNGNITLLKGVKGRSDIGLLSLFEHYNVCKVGSYLKTPRYPIWVVCSESHFSVLF
CLRKELLSDWRIERRFDLYYYDGLANQEDEIRLTVDTSQSSIPETDSELTPPLEHCIRTK
WKGALIDWNGTEPIL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggataacggaaatgctgttgtggaagaagtggctgcatcgttagtaagagaatatctc
agtcgaaagggactgaagaaaactattatgtgcatggatgaagaacttccgcgcactgat
ttaagtattaataacagaaatgagcttcgcaaaatattacatctggattcactgtataag
aaaaacaaggtccagaaagtccaacttaaagcaatgctggaaattattgtgaaacattta
atggaaaccactcagcaaactatttcaacagcagagactgatttattttttattcaacaa
aaaacaaaggtgaaatccaagcctgtaggggcattgagtgtgcagttgtctgatgttgct
gatgatgagacgggtggaagcacagctgtttccgaacagagtaaaacagattttggaagg
tctgctgatgataaaacacacatctcctacacaaaagctcctttcaaaacttccccagtg
tacaataaggctgcaatactggaggctgggagcagcgagccatcttcagaaagtgaacgg
gaaaatctgccaaagtttatgtcttcagcaaatgacaatgaaggtgtcaggtctgttttt
agtactggtgaagtaaaaaatgcttttgcagaacttcagaagcaaagatcaactcgccca
ctgcgcggtatgatggctggacctatttctagttcccaagatgactgcagtaaaaaacga
atttttcggagatattcagcatcaaatttggctactcctctaaaagatgaagatgtgcac
aacagacaattacattttcagcctgcaaatactgctgctgttaacaatttatttcctcat
gaaactgatatacagttacagagtacacaggacaaaaaaacagattctgcctcaaagaca
ttgcttgcatcccaaaaagtagtacagaaactcgattttaaggaagatactttgaaactg
agaaatgaagttaaatctcttttcaaggaaatgccaagcattcgaaggaaagattcttcg
gaaaactttgaaccagatcacgtccaactgaaggctatggaaatagatgacattgaggag
gatgagaggtttgaaggaggcaaaccccacgttttttccagtgtgaagaagattaatgta
gatgcatctcctattgatttaaaccttgccattgaacttaaaaaactcttatttggctca
agcaatgcctgctttaatgaagaatggaagattcaaagttttgtatttagtgaattacca
gatttaagatatggtattgtgcagaaaaagggtggttcttgtgggattcttgcatctgtt
caagcctgcgtattacaaaaactactgtttgaagatggaagcagtgacagcagaactcat
aagttaaaaccattgaagactcaactaagcaaatgccttgctttggccatagcagaaatt
ttatggcgtgctggtgagaaaaagaaagctgttgttgccctttcttcaggcagaaagcat
tttattccagctggaaggtataaaactgatggaattctagaaacggtgatattgaataca
gtcaatacactagaggatttaactttgttccttgaacaaaatattcagcagtttgaactc
ggcccatatggatgtattttgcttaccctgtctgcaatcttttcaagatctatggactta
attaggaaagattttgatgttccaagtaacactctgattggagcccatggatactgcaca
caggaactagtaaacctgctactgactggaaaagctgtttcaaatgtatttaatgatgaa
atacagttagattctgggaatggaaacatcactcttttaaaaggagttaaaggaagaagt
gatattggattgctttcactatttgaacattataacgtatgtaaggttggctcctattta
aaaaccccaaggtaccccatatgggtggtttgtagtgaaagccatttcagtgttctgttc
tgtttgcgtaaggagttacttagtgactggaggattgaaagacggttcgatttgtattac
tacgacggactagctaatcaggaggatgaaattcgtctaactgtggatacttctcaaagc
agtattcctgaaacagacagtgagctcactcctcctcttgaacattgcatcaggacaaag
tggaaaggagctttgattgactggaatggaacagagcccattctctga
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