Polypterus senegalus (gray bichir): 120529688
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Entry
120529688 CDS
T08668
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120529688 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120529688 (puf60b)
Spliceosome [BR:
psex03041
]
Complex A
U2 snRNP components
U2 related factors
120529688 (puf60b)
Complex B
120529688 (puf60b)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
120529688
NCBI-ProteinID:
XP_039609664
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All DBs
Position
5:complement(183534020..183598970)
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AA seq
513 aa
AA seq
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MENGQTTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAV
TMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD
SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEAR
SFNRIYVASVHPDLSDEDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA
VSSMNLFDLGGQYLRVGKAVTPPMPIHTPATPGGLPPAAAVAAAAATAKITAQEAVAGAT
VLGALTTPTALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVAIPQVGIVNPVLASP
PTLIAVADAKKEKEEEEVSQDGERAEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVL
RNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSTAAEMN
KAIQALNGRWFGGRKVIAEVYDQERFENSDLSA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggacagactacagcgtcaaagcttggccttcctccactcaccccagagcag
caggaggccctgcagaaggcaaagaagtatgcaatggagcagagtattaagagtgtgttg
gtgaaacagaccatcgctcatcagcaacaacaactgactaaccttcagatggcagcagtg
acaatgggctttggagatcctctctcacctttacaatcgatggcagctcagcggcagcgc
gcgctggccattatgtgtcgggtctatgtaggctcaatttactatgagctgggagaggat
accattcggcaagcatttgctcctttcgggcccatcaaaagtatcgacatgtcttgggat
tctgttacaatgaagcacaagggatttgcttttgttgaatatgaagtcccagaagctgcg
cagcttgctctggaacagatgaactctgttatgttaggtggaaggaacatcaaggttggc
cggccaagtaatattggacaagctcaacccattattgatcaacttgcagaagaagcacgg
tcatttaatcgtatatatgtggcatctgtgcatcctgatttatcagatgaggacattaag
agtgtctttgaagcttttggaaagattaaatcatgcacgcttgctagagatcccacaact
ggaaaacacaaaggatatggatttatagaatatgaaaaggctcagtcttcacaggatgca
gtatcttcaatgaatctttttgacttaggtggtcagtatcttcgagttggtaaagcagtc
actccaccaatgccaatccatacgcctgcaacacctggaggattgccaccagctgctgct
gtagcagcagcggcagcaactgccaagattacagcacaggaagctgtagcaggagcaaca
gtccttggtgctcttactacaccaacagcgctgacattagcacagccacttggtgcttta
ccacaagcagtcatggcagcacaagcacctggtgtcattacaggagtaacacctgcccga
cctcccatcccagttgctattcctcaggttggtatcgtaaacccagtcctggcatctcca
ccaacgcttatagcagttgcagacgcaaagaaagaaaaggaagaggaggaagtttcccaa
gatggcgagcgggcagagatgttgagtgaacaggaacacatgagcatttctggtagcagc
gcccgacatatggtaatgcaaaagctgttgagaaaacaggagtctactgtgatggtattg
cggaatatggttggtcctgaagacattgatgatgatctagaaggggaagtaacagaagag
tgtggcaaatttggagcagtgaaccgtgtaattatctaccaggagaagcagggtgaagaa
gaagatgccgaagtcattgtaaagatctttgttgaattctctactgcagcagagatgaac
aaagctatccaggccttgaatggccgttggtttggtggcaggaaagtcattgcagaagtg
tacgaccaggagcgttttgagaacagtgatctgtctgcataa
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