Polypterus senegalus (gray bichir): 120529698
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Entry
120529698 CDS
T08668
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04217
Necroptosis
psex04622
RIG-I-like receptor signaling pathway
psex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120529698 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120529698 (cyldl)
04625 C-type lectin receptor signaling pathway
120529698 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120529698 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120529698 (cyldl)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120529698 (cyldl)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C67
120529698 (cyldl)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120529698 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120529698
NCBI-ProteinID:
XP_039609686
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Position
5:185854984..185919209
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AA seq
775 aa
AA seq
DB search
MGTTLNISWPDVNYLYYILMEGFKDLIDNFQAGNICYMEEAEYLKTVSESPDKKLRVYFP
DTYTPRNADVSCLQPLKTEEAGLLLAITDDSERLHWYLEKQQLEKALALNTDQEIIVDVN
SQLCRGVLRYIGPITSKRLFYGVYIFPTYFGVELQGDDAKNGVCDGTYQGKRFFQCDHNS
GIFVPFSKLRFLSAQKMPTAVIKEPSVDNMEQLKIGDKVQFFTEDNTTKFGVVVELMEKE
AVIVTDGEESSSDLKIPLECVMKEEMLSKDLEHDGKMDRREPLLVQAKRKNSDETFGLTL
NSMVEVYLTAGKTAYGIVRWLGKLPGKSETFAGLELEDDVGICDGSFKGQRCFFCAPRRG
LFVRLQVCRPDSRFQRKSPRCDMNSSYQSDYQYNDRVPPLVNGKASQVLLGKMKGIQGHC
NSCYMDSVLFSLFSCSLVLDSMLYKSSNKKDSPIQTTLREEIVNPLRAKGFVPSDSVMKL
RTQLMERGHSASFTTDEKDPEEFLTLIMHHILEVEPLLHLQQPGQKEQGAYCYQIFIEQD
NGLIIPSVQQLLEHSFHSSVLKLSEVPSCLIIQMPRFGKKFKLFDKIIPSLELDITDLLS
NNPRSCVICGDLADQECSDCFKDHIFSNAGFKQFCRNCSQQVHCHPRRKDHHPTKIQLPQ
GLQNGCDAQRYRVHREVLELFAVLCIETSHYVSFVKYGPQNQQWMFFDSMADRHGDKDGY
NIPTVIQCPEVAKYLDMPLNELARQNPRDMEGVAKRLFCDAYMFLYQSKRMALYK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggcactactttaaatatatcatggccagatgtcaattatctctattacattttaatg
gagggttttaaggatttaattgacaacttccaagcggggaacatttgctacatggaggaa
gctgaatatctgaaaacagtcagtgagtcacctgacaaaaagttacgtgtgtattttcca
gacacatatacgcccagaaatgcggatgtttcttgtctgcaacctctaaagactgaagaa
gctggtcttctcttggctattactgatgactcggagcggcttcactggtatctggagaaa
caacaactggagaaggctttggccctgaataccgatcaagaaattatcgtggatgtgaac
tcccagttgtgtcgcggtgtgctcaggtacattgggccaatcacttcaaaacgtctgttt
tacggggtgtatatattccccacctattttggagtggagttacagggtgatgatgcaaag
aatggagtttgtgatgggacctatcaaggaaaacgttttttccagtgtgaccacaacagt
ggtatatttgtgcctttcagtaagcttaggttcctatctgcccaaaagatgcctaccgca
gttatcaaggaaccatcagtggacaatatggaacagctgaaaattggagacaaggtccaa
ttcttcacagaagataacacaaccaaattcggagtggtcgtagagttgatggagaaggag
gctgtgattgtaacagatggagaagaaagcagctctgaccttaaaataccactggagtgt
gtgatgaaggaggagatgctctccaaagatctggagcatgatggcaagatggacaggcgg
gagcccttgctagtccaagcaaagaggaaaaatagtgatgaaacgtttggactgaccctg
aactccatggtggaagtgtacctaacagcagggaaaactgcctatggcatcgttcgttgg
cttggcaagcttccagggaaaagtgaaacttttgcaggactcgaactggaggatgatgta
ggaatttgtgatggatcattcaaaggacagagatgtttcttttgtgccccaagacgagga
ctgtttgtgagactgcaggtttgccgcccagacagccgctttcaaaggaagagcccacgc
tgtgacatgaacagctcctatcaatcagattaccagtataatgatagggtgccaccactg
gtgaatgggaaagcctctcaggtcctgctgggcaagatgaaaggcatacagggccactgc
aactcctgctacatggattcagtacttttcagtttattttcctgttctcttgtgctggac
tctatgctttataaaagcagcaacaaaaaagactctccaatccagaccaccttgcgtgag
gaaattgtcaacccactcagagcaaaaggatttgttccctcagacagtgtgatgaagctg
aggactcagctcatggaaaggggacatagtgccagttttaccactgatgagaaagatccc
gaagagttcttaaccctcatcatgcatcacattttggaggtggagcctctcctacactta
caacagccaggacaaaaagagcagggtgcgtactgctaccaaatctttattgagcaggac
aatggattgatcatcccttctgtgcagcagcttctggaacattcctttcacagctccgtc
ctcaagctgtctgaggttccatcatgcctgatcattcagatgccacggtttggaaagaag
ttcaagctctttgataagatcattccttctctagaactggacattacagatctgctttct
aacaaccctcggtcatgtgttatctgtggagacctggctgaccaagaatgcagtgactgt
ttcaaggaccacattttctcaaatgcaggatttaagcagttttgcagaaattgctcacaa
caggttcattgtcacccacgccgcaaggaccaccaccctaccaaaatccagctgccacag
ggtttacagaatggctgtgatgcacagagataccgtgtgcaccgagaggttctggagctg
tttgctgtcctctgcatagaaacaagtcattatgtttcatttgtcaagtatggaccgcaa
aatcagcagtggatgttcttcgacagcatggcagatcgtcacggtgacaaagatggctac
aacattcccacagtgatccagtgtccagaggtagccaaatacttggacatgcctttgaat
gagctggccaggcagaatccccgtgacatggagggggtggctaaaagactcttctgcgat
gcctacatgtttctgtatcaaagtaaaaggatggctctgtataagtga
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