Polypterus senegalus (gray bichir): 120529731
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Entry
120529731 CDS
T08668
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120529731 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120529731 (exosc4)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120529731 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
120529731 (exosc4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
120529731
NCBI-ProteinID:
XP_039609732
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Position
5:complement(188168170..188173714)
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AA seq
245 aa
AA seq
DB search
MAGIELLSDQGYRVDGRKPNELRKIQARMGVFSQADGSAYIEQGNTKALAVVYGPHEIRG
SRSKSQHDRAIINCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYSACVNAATLAVVDAGIPLRDYVCACSAGFVEDTPLVDLSHLEESA
GGTQLSLAVLPKAEHLALIEMDSRLHQDHLESMMDAATQACKDLYAVLDRVVRDHLQEVT
TSIGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatcgagctactctctgatcagggctacagagtggatggcaggaagccgaac
gaactgcgtaaaatacaagcccgaatgggagtgtttagccaagccgacggatcggcgtac
atcgagcagggcaacacgaaggcgctagcggtggtatatgggccgcacgagattcgaggt
tctcgtagcaagagccaacatgacagagccatcattaactgtcagtacagcatggccacc
tttagtactggtgagcggaaacgtcgaccacatggagatcgtaagtccagtgagatgact
cttcacctcaaacagacttttgaggcagccatattgacacagctgtatccacgatcacaa
attgacatttacgtgcagattttgcaggctgatgggggcaactacagtgcatgtgtcaat
gctgctactcttgctgtggtggatgctggaattccactgcgggattatgtatgtgcctgt
tctgcaggctttgttgaggacacaccactagtggacttaagccatttagaagaatcagca
ggtggcacccaactctcccttgctgtgttgcccaaggctgaacatctagctttgatagag
atggactctcgactacaccaggatcatcttgaaagtatgatggatgcagctacacaggct
tgcaaagatctttatgctgttctagatcgggtagtaagggaccaccttcaagaagtgacc
acatcaataggggagtga
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integrated database retrieval system