KEGG   Polypterus senegalus (gray bichir): 120529731
Entry
120529731         CDS       T08668                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120529731 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psex03019]
    120529731 (exosc4)
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120529731 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     120529731 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Dicer_dimer
Other DBs
NCBI-GeneID: 120529731
NCBI-ProteinID: XP_039609732
LinkDB
Position
5:complement(188168170..188173714)
AA seq 245 aa
MAGIELLSDQGYRVDGRKPNELRKIQARMGVFSQADGSAYIEQGNTKALAVVYGPHEIRG
SRSKSQHDRAIINCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYSACVNAATLAVVDAGIPLRDYVCACSAGFVEDTPLVDLSHLEESA
GGTQLSLAVLPKAEHLALIEMDSRLHQDHLESMMDAATQACKDLYAVLDRVVRDHLQEVT
TSIGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggctgggatcgagctactctctgatcagggctacagagtggatggcaggaagccgaac
gaactgcgtaaaatacaagcccgaatgggagtgtttagccaagccgacggatcggcgtac
atcgagcagggcaacacgaaggcgctagcggtggtatatgggccgcacgagattcgaggt
tctcgtagcaagagccaacatgacagagccatcattaactgtcagtacagcatggccacc
tttagtactggtgagcggaaacgtcgaccacatggagatcgtaagtccagtgagatgact
cttcacctcaaacagacttttgaggcagccatattgacacagctgtatccacgatcacaa
attgacatttacgtgcagattttgcaggctgatgggggcaactacagtgcatgtgtcaat
gctgctactcttgctgtggtggatgctggaattccactgcgggattatgtatgtgcctgt
tctgcaggctttgttgaggacacaccactagtggacttaagccatttagaagaatcagca
ggtggcacccaactctcccttgctgtgttgcccaaggctgaacatctagctttgatagag
atggactctcgactacaccaggatcatcttgaaagtatgatggatgcagctacacaggct
tgcaaagatctttatgctgttctagatcgggtagtaagggaccaccttcaagaagtgacc
acatcaataggggagtga

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