Polypterus senegalus (gray bichir): 120529748
Help
Entry
120529748 CDS
T08668
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120529748 (zeb1b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120529748 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-met
Homeodomain
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120529748
NCBI-ProteinID:
XP_039609779
LinkDB
All DBs
Position
5:complement(191025736..191350382)
Genome browser
AA seq
1118 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVETNSDSDDEDKLHIVEDESLTDPADCDNNLPDD
DLPSNHTVLPENGRRGDEEGWDEDVKEDDSLGPDAHTGDIQFKVKDECGSEAEDEQNNDP
SVEEILQQGDTAVIYPEAPEEEQRQGTPEASSHDENGTPDAFSQLLTCPYCDRGYKRYTS
LKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTAHKSGRDQRHVAQSGGNRKFKCTE
CGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGVMPVNGRPRP
GVKTSQCPSPSLSSSPSAPSRTQLREKIDNSKPLQEQLPLNQIKTEPVDFEYKPIVVSGI
NCAAPLQNGVFNGGSSLQATASSQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVLENA
HANSSSKEQGTIGSATVQQGSHSVISAFSLPLVDQDGTTKIIINYSLEQPSQVQVLPLSP
KKEIPGNTEICKTEKLPEDLTVKTEKSKSPAAENGSSTCLLCDDCPGALNGLQEPKHCNS
KCNSGAQTPQQNGTDSEKCDSAVSSLPPDANVFPGQPPLKNLLSLLKAYYALNAQPTTEE
LSKISDSVSLPLDVVKKWFEKMQSGQISMETSSPPSEKEVLGPECDQAKTLSLPAGESQE
GAAVAQSPVLLTTSQVISIRPLNMKVNGSSSTTPPPLPLNLSSSRPVAVKEEEDSEQDAQ
AEPLDLSLPKQPRENADRATSTSVYQNSVYSVQEEPLNLTCTKKEQPPSDSINTNPNPIY
VSSSSANPINIAIPTVTTQLPTIVAITDKNSVPCLRALATNKSTILIPQVTYTYSTTATS
PAGCEAQQKAVQTNGNQDERQDTSSEGVSTVEDQNDLDSTPPRKKMRKTENGMYACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKREAEEREGPEQHEEEEDEAEGENGVTEEIQLSESRAASPPSHM
DSDDRESSTREDEESEKEDEEDEEEETEVKAECTESQAQEEEEDEEEEEKEKVVEQQGAE
KEEEEEEEEESAKEAAAITNPSQDSEDQQPPEGSVKEI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaatccgaggaggaataacgtt
acaaattacaacaatgtggtggaaacaaactccgactcggacgatgaagacaagttgcac
atagttgaagatgaaagcctgacagaccctgctgactgtgataataatctgccagatgat
gatttgccaagcaaccacacagtattaccggaaaatggaaggagaggagatgaagaaggt
tgggatgaagatgttaaagaagatgactccctggggcctgatgctcatacaggggacatt
caatttaaagtaaaagacgagtgtggctcagaagctgaagatgaacaaaacaatgaccca
agcgtagaagaaatcctacagcagggagatactgcagttatttacccagaagcaccggag
gaggagcagaggcaggggacgcctgaagccagcagtcatgatgaaaatgggacgccggat
gcattttctcagcttctcacgtgtccatactgtgacaggggatacaaacgctacacatca
ctaaaggaacacatcaaatatcgccacgagaagaacgaagataacttcagctgttctttg
tgcagttacacttttgcctacaggacgcagcttgatcgtcacatgaccgcacacaaatct
gggcgagatcagcgtcacgtagcacagtctggtggtaatcggaaattcaaatgcactgaa
tgtggaaaagcatttaaatataagcaccacctaaaagaacacttgcgtattcacagcggg
gagaagccatatgaatgcccaaactgtaaaaagcgattttcccactccggctcctacagc
tcccacatcagtagcaaaaagtgcatcggggtcatgccagtgaatggcagaccccggcca
ggtgtcaagacgtctcagtgtccttccccatcactgtcctcatcgccaagtgccccttcc
agaactcagcttcgcgagaagatagataacagcaagccgttgcaagaacagcttcctcta
aaccaaatcaaaactgaacctgtggattttgagtacaagcctattgtggtgtccggaatc
aattgtgccgcccctctgcaaaatggagtgtttaacggcggctcctcgcttcaggccacc
gcgtcgtctcagggcgtggtgcaggcggtggttttgccaactgttggtttggtctccccc
atcagcatcaacctaagcgacattcagaatgttctcaaagtagcagtcctcgagaacgct
cacgccaattcttcgtccaaagaacaaggaacaatcggctcggccacagtccagcagggt
tctcattcagttatatctgcttttagtcttcctctggttgaccaagatggaacaaccaaa
atcatcatcaattatagtctagagcaacccagccaagttcaggtactgcctctgagccca
aaaaaggagattcctgggaataccgaaatctgtaaaactgagaagctgccagaagacctc
accgtgaagacggagaaaagcaaaagtccagcggctgaaaatggcagcagcacgtgttta
ctgtgcgacgactgcccgggcgctttgaatggacttcaagagcctaagcactgcaactcg
aaatgcaacagtggtgctcagacccctcagcagaacggaacggactcggagaaatgtgac
tctgccgtttcgtctctgccgcccgatgcaaatgtctttccaggtcagccccctctgaag
aatctcctgtcactcctgaaggcgtattatgccttaaatgcacagccaactacggaggaa
ctctccaagatttccgactcggtgagcttaccgctcgacgttgtgaagaaatggtttgag
aagatgcagagcgggcagatttccatggagacttcaagtccgccgtctgaaaaggaggtc
ctcggccccgagtgcgatcaagcaaaaacgctctctcttccagcaggggaatcacaggaa
ggcgccgcggtggcccagagcccggtcctattgactacatcccaggtgatttctataagg
cctttaaacatgaaggtcaacggctctagcagcaccactcctcctccgttaccactaaat
ttatcttcgtccaggcctgttgcagtgaaagaagaagaggactcggaacaggatgcacag
gcagagccccttgatctgtcactaccaaagcaacccagagagaacgcggaccgagccacc
agtaccagtgtttaccagaacagtgtttactccgttcaggaagaacccttgaatttaact
tgcacaaagaaggagcagcctccaagcgacagtattaatacaaacccaaatcctatttat
gttagttcctcaagtgccaatcctattaacattgccatccccactgtcaccactcagctc
ccgactattgtggccattactgacaagaacagcgttccttgtctgagggctctggctacc
aacaaatcgaccatccttatcccgcaggtgacctacacgtactcaacgacggccaccagc
ccagccggatgtgaagctcaacagaaagcagtgcagacgaatggaaaccaggatgaaaga
caggacacgagttcggagggagtgtcgaccgtagaagatcagaatgacttggactccact
cctccgaggaagaagatgaggaagacagaaaacggaatgtatgcatgtgacttgtgtgat
aaaatattccagaaaagcagctccctgttgagacacaagtacgaacacaccggtaagagg
ccccatgagtgtgggatatgcaacaaggctttcaaacacaagcaccacttgattgaacac
atgcgactgcactctggcgagaagccgtaccagtgcgacaagtgcggcaagcggttctcc
cactccggctcctactcgcagcacatgaaccatcgatactcctactgcaagagggaagcc
gaggagcgggagggtcctgagcagcacgaggaagaggaagacgaggcagaaggagagaac
ggcgtcacggaggagatccaactgtccgaaagccgggctgcctctcctccttcacacatg
gactctgatgacagagagagcagcacccgggaagacgaggagagcgagaaggaggacgag
gaggatgaggaagaggagacggaggtgaaagcggaatgcacggaaagtcaggcacaggaa
gaagaagaggacgaggaggaggaggagaaggagaaggtagtggagcagcagggagcagag
aaagaagaagaagaggaggaggaggaggaaagtgcaaaggaagcggcggccatcacaaac
ccaagccaagattcggaggatcagcagcctcctgaaggcagcgttaaggaaatatga
DBGET
integrated database retrieval system
