Polypterus senegalus (gray bichir): 120529815
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Entry
120529815 CDS
T08668
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120529815 (ift57)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
120529815 (ift57)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IFT57
HBM
MCPsignal
Sec8_N
WXG100
ApoLp-III
DUF4407
Replic_Relax
DUF1664
Prominin
Stap_Strp_toxin
Ribonuc_2-5A
COG3_N
Herpes_UL92
KxDL
Fib_alpha
Mod_r
CSN5_C
Fez1
GRDP-like
Exonuc_VII_L
MscS_porin
Motif
Other DBs
NCBI-GeneID:
120529815
NCBI-ProteinID:
XP_039609922
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Position
5:complement(202971851..203032452)
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AA seq
409 aa
AA seq
DB search
MSEENRRAEEDDRGPGSSYQMFVVMEDLLDKLKLLNYEEEVLRKNNMKSLSRHYFALPTN
PGEQFFMFTAIAAWLINKAGSHFEQPQEYDDPNATVSNILMELRKFGGVVDFPPSKLKAG
NGEHVCYVLDRLAEEALKQTRFIWNKPKYPSEAPESETVMEDDAELTLEKLEEEIAHEDP
DDYEDENVIGIEALKERSHKSEIMESSKPDEILESSTDATEWNLEVERVLPQLKVTIRTD
NKDWRIHVDQMHQHKDGIESSLKDTKTYLNKLQDEISKTLEKVASREKYINNQVKDLIQE
YRGAQSYLSEAKDRYQQVSGGVTERTRALAEISEDLEKIKQEMEEKGSSMSDGAPLVRIK
QSLTKLKQEIVQMDIRIGVVEHTLLQANLKERSDMTRDMHATFMLDSTY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaaaaccgaagagccgaagaggacgaccgcggtccggggtcttcctatcag
atgttcgttgtcatggaggacttgctggataaattaaagctgctgaactacgaggaggag
gttctccggaaaaacaacatgaagagtctgtcgagacactactttgctcttcccactaat
ccaggagagcagttcttcatgttcaccgctatcgccgcttggctcatcaacaaagccggc
tcccactttgaacagccgcaggagtacgacgaccccaacgcaacggtgtcaaacatactg
atggagctccgaaagtttggtggagttgttgattttccaccttcaaagctgaaggctggc
aatggagagcatgtgtgttatgttttggatcgcttggcagaggaagcattaaagcagacg
cggttcatctggaacaaacctaagtacccatccgaagcacccgaatccgagactgtgatg
gaggatgatgccgagctaacgctggagaaactggaagaagagattgcacacgaagatcca
gatgattatgaagatgaaaatgtcataggcatagaggctttgaaagaacgctctcataaa
agcgaaatcatggagtcttcaaagccagatgagatcctggaatcttctacggatgccact
gagtggaacctggaagtagaaagagttctacctcagctgaaggtcaccatcaggactgat
aataaggactggagaatccacgtagaccaaatgcatcagcacaaagacgggattgaatca
tctctgaaggatacaaagacttaccttaataaactccaagatgaaatcagcaagactctg
gaaaaggtagcaagtcgggaaaagtacattaacaaccaggtgaaggatctgatccaggag
taccgtggggcccagtcctatctcagcgaggcaaaggatcgttaccagcaagtgagtggt
ggagtaacagaaagaacccgggcattagctgagatttcagaagatcttgaaaaaattaaa
caggaaatggaagaaaagggaagcagcatgtctgatggagctccattggtgaggatcaag
cagagtttaacaaagctgaaacaagaaatcgttcagatggacattcggattggagtagtg
gagcacactcttcttcaagccaatctgaaggaaaggtccgacatgaccagagacatgcat
gccacctttatgttggattcgacttattaa
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