Polypterus senegalus (gray bichir): 120529940
Help
Entry
120529940 CDS
T08668
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120529940
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
120529940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
I_LWEQ
ISG65-75
DUF3837
Apolipoprotein
SpecificRecomb
Exonuc_VII_L
DUF4407
DUF1664
UPF0184
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
120529940
NCBI-ProteinID:
XP_039610083
LinkDB
All DBs
Position
5:complement(203445473..203491000)
Genome browser
AA seq
411 aa
AA seq
DB search
MLVKMSEESRRSEDYEPGPGAAYTLFVVMEELLDKLKLLNYEEEVLRRNNVKSLSRHYFA
LPTNPGEQFFMFTTIAAWLINKAGCYFEQPQEYDDPNATVSKILKEFRNFGGSVDFPPLK
LKTGSGENVCNVLDRLAEEALKATCISWKRPNYPTEAPEEGYFIEDIAEFSLDRLEEEIT
EEPDDYEDEHLLDLEALKEPSYKSDLRESSKPDNILESCVDASEWKLETERVLPQLKVTI
RSDKDWRVHVEQMHQHKDGIESSLKDTKGYLNRLQDEISATLEKVGSREKNINTQMKHLI
QEYRVAQSQLSEAKERFHQGSSRVTERTRILAEIAEELDSVKQEMEEKGSSISDGAPLVK
IKQSLTKLKQEIIQMDIRIGLVEHTLLQAKLKEKSNMTRDIYSGFPTQNRF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcaaaatgtccgaagaaagccggagatccgaagattacgagcctggtcccgga
gcggcttacaccttatttgtagtcatggaggaactactggataaattaaagctgctcaac
tacgaggaggaggtgctccggagaaacaacgtgaagagcctgtcgaggcactactttgca
cttcccactaatcctggagaacaattctttatgttcaccactattgctgcttggctcatc
aacaaggctggctgctattttgaacagccgcaagagtacgatgaccccaatgctactgtc
tcgaagatactgaaggagttccggaactttggtggaagcgttgatttcccacctttaaaa
ctgaaaacgggaagtggagaaaatgtatgcaatgtgttggaccgtttagcagaagaagcc
ttaaaagcgacttgcatcagctggaaaagacctaattatccgactgaagcccccgaagaa
ggatatttcattgaggatattgctgaattctcactggacaggctggaagaggagatcact
gaagagccagacgattatgaagatgagcatctcctggatttagaagctttgaaggagcca
tcatataaaagtgatttaagagaatcttcgaagccagacaatatacttgaatcctgtgtg
gatgcctcagagtggaaattggagactgaaagagttcttcctcagctgaaagtcacaatc
agatccgataaggactggagagtccatgtggaacaaatgcaccaacataaagatgggatc
gagtcgtctctaaaagatacaaagggttaccttaataggcttcaagatgaaatcagtgca
acactggaaaaagtgggaagtcgggagaaaaatattaatacccagatgaagcatctcatc
caggagtaccgcgtggcccagtcacagcttagtgaagcaaaagaacgttttcatcaagga
agcagtcgagttacagaaagaaccaggattttagcggagattgcagaagaactagacagt
gtgaaacaggaaatggaagaaaaggggagtagcatatctgatggagcaccattagtaaag
atcaagcaaagtctaacaaaactaaaacaagagatcatacagatggatattcgcattgga
ctagtagagcacactcttcttcaagccaagctgaaggaaaagtcgaacatgacaagagac
atttactcaggctttccaacccagaatcgattttaa
DBGET
integrated database retrieval system
