Polypterus senegalus (gray bichir): 120530088
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Entry
120530088 CDS
T08668
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120530088 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120530088 (nup160)
03036 Chromosome and associated proteins [BR:
psex03036
]
120530088 (nup160)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120530088 (nup160)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120530088 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
120530088
NCBI-ProteinID:
XP_039610182
UniProt:
A0A8X7X736
LinkDB
All DBs
Position
1:complement(101087699..101132820)
Genome browser
AA seq
1397 aa
AA seq
DB search
MATAVLERSFTEINAFPRETTTRFREITVNTGVNAIPGGIRYPDSAGGFHYEESGKLLPI
TSNWFIHWSTSGDTLQLLEQSLDINLLNNAVSLKFLNCSLLPGGVHIYETHSHVFILIVT
NQTLHRIVLPHPARMYRSEFITEMQMQSVFTDIGKVNFRDSSTSYIIPSVPGHMASSTAS
SAWITSDGEAVFVIASASGGILLIRLPPHDAQGSVSIIELKQSSVMQRLLTGWMPTAIRG
DQGHLDTPLSLAVRQLESDTFIFSLCQDHKLRMWSYKDQICLLVADMLEYMPVSHDIRHT
AGQGHKLRLSFSASMGLCLGVYLSFPKRGQFCIFQLVTTEANRYSLDHISSLYSSQETLV
DFSLTSTDVWALWQDDESQTIVKYINFEHNVAGQWNQVFVEPPLEEEIHIGDDHDPRETY
LEKLFSPGRFTALALVKALQIYCRGGEKIIDLSWEALKKEVTIAVETELQGSVTEYEFSQ
EEYRQLQVEFWSKFYQCCLQYQEAISCPLALFVNSHTALVCLLRKGFISFLVPCFAVDHL
YLSSDDQLVTEDETPLTDDASTARDLLLLISCLRRLGETVSGDLAYMMEQALEHLESPER
EAEKIMETLLANDNDGVIEDIQNQLQDIRNPVSAMSLLLREMDYATDVEMEGSHGEGQPL
SVRMTLAQICGSFAAATVVCRAAHQSASTRFLLCRDLLILQQLLLRLGENAYLGGGHQLF
ELQQDLLSQTSYLLYSYYVIRWASQCLSTVVAMDTLEANLQHLSVLELSDSPALMPSKSV
SSPQTLLELFFQNVARKRIISLIHAQSDSPLSRGVFSWPHLITMITVYLFQEIWPNNPGF
LFPECMMGNCQYTQLQEYVRLISPWCQVNVGSCRFMLGQCYLATGEGHKALQCFQEAATE
VGREVFLDRLISSEEEELTSAPRLQFYNKVLRLLEDVGLPELVIQLATTAISEAMEDVRS
RAALQTRIFKHHLDLGHNTLAYEALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFPYV
NLHDEVVSIIESRARAVDLMTHNYYELLYSFHINRHNYRKAGTVMYEYGMRLGREVRTRN
GLQKQVNCYLVAMNCLRLIRPEYAWIVQPASGGVYERPGASPKRDHDGESATSPVNRRIE
ILELKDLQKEYILAQNRLTLVRHNPAAAPIAGSASADETVVLLVQAGLFDSALSLCHMFK
LSLIPVFEGLAYKCIRLQYGGEQVQAEAWGWLAANQLSLVTTTAESSATDEAWRLLSSYL
DRYKTQNAQYHKCVINKLLSHGVPVPDWLVNGYKKVDAAGLLRLYLNYDLLEEAVEFVLE
YIDALLGKGHQYFGIERPLSATAPPVWLPYVAIDQLLHALGENQYINSTHLDQRLRDKLE
KYHAVVIQTTTTRKQVV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggtgttggagcgcagcttcactgagataaatgcgtttccaagagaaacg
actacgaggtttagagaaataacggtgaatacaggagttaatgcaattcctggtgggatc
agatacccagacagtgcagggggctttcattatgaagagagtgggaaacttttgcctatc
accagcaactggttcatacactggtccacttctggtgacactctacagctactggaacag
tcactggatattaacctcctgaacaatgctgtcagcttaaaatttctaaattgtagtcta
ctcccaggaggggtccatatctatgagacacacagtcatgtcttcatcctaattgtaact
aatcagaccctccatagaatagtgctacctcaccctgctcgcatgtacagaagtgagttc
ataacagagatgcaaatgcagtctgtttttacagatattggcaaagtgaacttcagagat
tcatcaactagctatattatcccttcagtaccagggcatatggcatcctctactgcctct
agtgcctggattactagtgatggagaagcagtctttgtcattgcttcagcttctggtggt
attctgctaattcggctgcctcctcatgatgcccaagggtcagtttcaatcatcgagctg
aagcagagctcagtgatgcagaggctccttactggctggatgccaactgcaattagaggt
gatcaaggccatttggacacaccacttagtcttgctgtccgacagctggagagtgacaca
tttatattttctttgtgccaggaccataaactgcggatgtggtcctacaaagatcagata
tgcttactagttgctgatatgttggagtacatgccagtgagccacgatattcgtcatact
gctgggcaaggacacaaactgcgtctctccttctcagcttcaatgggtctctgtcttggg
gtttaccttagctttcctaaaagaggacagttctgcatttttcagcttgtgactactgaa
gctaacagatacagtttggatcacatttcttcactttactcatcccaggagacgttggta
gatttttctttgacttccacagatgtatgggcgctatggcaagatgatgaaagtcaaaca
attgtgaagtacattaactttgaacataatgtagcaggtcagtggaaccaagtgtttgtg
gaaccaccattggaggaagaaatccatattggggatgatcatgatcctagggaaacttac
ctggaaaagctttttagtcctggtcgctttacagctctagcgcttgtgaaagctctgcag
atctattgccgtggtggggaaaagattatcgatctttcatgggaggcactgaagaaagaa
gtcactattgctgttgaaacggagcttcaaggcagtgtgacagagtatgagttctctcaa
gaagaatatcgtcaactgcaggtggagttctggtcaaagttctaccagtgctgtctgcaa
tatcaggaagcaatctcatgccctcttgcactgtttgtcaactctcacactgccttagtt
tgtctgcttaggaaaggttttatctcatttcttgttccatgctttgctgttgatcacctt
tacctgtcctcagacgatcaattggtgacagaagatgagactcctctcacagatgatgct
agtacagcacgagaccttctgttgttgataagctgcctgcgacggcttggtgaaactgtt
tctggggacctagcttatatgatggagcaagcactagagcatctggagtcaccagaaagg
gaagcagaaaaaataatggaaacattactggctaatgacaatgatggtgttattgaggat
attcaaaatcaactgcaggacattagaaacccagtgagtgcaatgagtctcctcttgaga
gagatggactatgcaactgatgtagaaatggaaggtagtcatggtgaaggtcaacctctg
agtgtccgaatgactctggcacaaatttgtggaagttttgctgctgcaacagttgtctgt
cgtgctgcacaccagagtgccagcactcgtttcttgctgtgtcgggacctcttaatccta
caacagttgctgctacgcctgggtgaaaatgcatatcttggaggaggccaccagctgttt
gaacttcagcaagacttactttctcaaacttcatacctgctgtattcctattatgttata
agatgggcaagccagtgtctgtcaacggttgtggccatggatacattggaagccaatcta
caacatctgtctgttctggaactttcagattctcccgctttaatgcctagtaaatcagtg
tccagtccacagactctgcttgaacttttcttccaaaatgttgccaggaagcgaatcatc
tctttaatacatgcccagtcagacagtcctctgagcagaggtgtcttcagctggcctcac
ctaatcacaatgatcactgtctacctcttccaggaaatatggcccaataacccaggattc
ctttttccagagtgtatgatgggaaactgccagtacacccagttgcaggaatatgttcga
ctgatcagcccatggtgccaagtcaatgttggctcatgtcgtttcatgcttgggcagtgc
tacctagccactggagaaggacacaaggctctccagtgtttccaggaagctgcaacagag
gtagggagagaagtgttcttggaccgactgattagttctgaagaagaggagttgacttct
gctccacgcctccagttttacaacaaggttctgaggttgttggaagatgttggtttacct
gaattagttattcaacttgctacaacagccatctctgaagcaatggaagatgtgagaagt
cgtgctgcccttcagactcgtatttttaagcatcaccttgaccttggacacaacacgttg
gcatatgaagctcttacacagaacccagatcctagcagacagctggactgtcttcgtcaa
ttggttgtggtgctctgtgagcgttcccaattacaggatttggttgaatttccttatgtg
aacctccacgatgaggtggttagcattattgaatcacgggcacgggctgttgacctaatg
actcataattattatgaactgctgtattcattccacatcaaccggcataattacaggaaa
gctggcacagtgatgtatgaatatggcatgcgccttggaagggaggttcggacgcgcaat
ggactacagaaacaggttaactgttacctggtagccatgaattgtttgaggctgatccgt
ccagagtatgcatggattgtgcaaccagcatctggtggagtgtatgaacgaccaggagcc
tctccaaaaagggatcatgatggagaatctgctacaagtccagtgaatcgtcgaattgaa
attttggagctgaaggatttacagaaagagtacattttggctcaaaaccggctcactcta
gtacggcacaacccagcagcagctccaatagcaggaagtgcttctgctgacgagacagta
gttttattagttcaggctggtctatttgactctgccctgtctttgtgtcacatgtttaag
ctcagtctgatacctgtatttgagggattggcatacaaatgtatccgtctacagtatggt
ggggagcaagtacaggcagaggcctggggctggctagctgctaatcagctttccttggta
accaccactgcggagtcaagtgccacagatgaagcatggaggcttctttcatcatatctg
gatcgatacaagactcagaatgctcagtatcacaaatgtgtcatcaacaagctgctgtct
catggtgtaccagtcccagactggcttgtcaatggctacaagaaggtagatgctgctggc
ttgctacgactgtacttaaactatgaccttctagaggaagctgttgaatttgttcttgaa
tacatagatgctttgttggggaaagggcaccagtactttggaattgagagacccctgtct
gccactgcaccaccagtgtggcttccttatgtggctatcgaccagttactacatgcgctt
ggtgagaaccagtacatcaacagcacccacctcgatcagaggctgcgagacaagctggag
aaataccatgctgttgtgatccagaccaccacaacaaggaagcaagtagtgtga
DBGET
integrated database retrieval system
